Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1083 |
Symbol | |
ID | 7382892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1130881 |
End bp | 1131885 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643654398 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_002552560 |
Protein GI | 222110296 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0421612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGAGG CGTCCTGGCT GGAGGATGCT GATCCAGCAG AGACAGGTGG GAGTCAGGCG GACGAGTTTG AGGCGGAACT GCGGGAGGTC GTCGTGGGCG CCGAGCAGCA TGCTCAGCGG CTGGACAAGG CACTCGCGGA ACTGGTCCCA GAGTTTTCCC GCAGTTATCT GCAGCAGTTG CTGCTCCAGG GCTGCGTACG CCTGAATGGG CGGGAGGTAC AGAAGCCCGC GTCGAGGGTC AAGGCCGGGG ACCGCATAGC GGTCGAGATG CGCCCTACGC AGCAGAGCCA GGCTTTTCGG CCCGAGCAAT GGCCATTGGA TGTGGTGTAT GAGGATGAGC ACATCCTCGT GATTCACAAG CCTGCGGGGC TGGTGGTGCA TCCCGCGCCC GGCAATTGGA GCGGCACGTT GCTGAACGCC TTGCTTGGCC GGGATGCGCA GGCGATGCAG GTGCCGCGTG CGGGCATCGT CCATCGACTG GACAAGGACA CCAGTGGCCT CATGGTCGTT GCGCGCAGCC GGTCGGCCAT GGATGCACTC GTCCGCATGA TCGCTGCGCG CGAGGTCAGC CGCCAGTATG TGGCGCTGGG GTGGGGTGGC TGGACGGGGG CCGCACATCG ATCGGTGCAT GCCCCGATCG GTCGTGACCC GCGCAATCGC CTGCGGATGG CGGTGGTCGA TTTAGCACAG CATCCAGGCA AGGAAGCCCG CACCGATTTC GACCTGATAG ATGCCAACGA GGAGGTGTGC CTCGTGCGTT GCACGCTGCA CACGGGGCGA ACGCACCAGA TCCGCGTGCA TATGGCATCC ATACGTCATC CCTTGGTGGC AGATGTACTG TACGGCGGCG CGATGGCCGG GCCCATGCAT CGACAGGCGC TGCATGCATT CCGGCTGGCG TTTGTACACC CGGTCACTGG CGCTCCCCTG GAGTTCCACG CGCCGCTGCC GGAAGACATG ACGCAGGCGC TGGATTTTTG GGGGCTGCGC TACAATCGCC CCTGA
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Protein sequence | MGEASWLEDA DPAETGGSQA DEFEAELREV VVGAEQHAQR LDKALAELVP EFSRSYLQQL LLQGCVRLNG REVQKPASRV KAGDRIAVEM RPTQQSQAFR PEQWPLDVVY EDEHILVIHK PAGLVVHPAP GNWSGTLLNA LLGRDAQAMQ VPRAGIVHRL DKDTSGLMVV ARSRSAMDAL VRMIAAREVS RQYVALGWGG WTGAAHRSVH APIGRDPRNR LRMAVVDLAQ HPGKEARTDF DLIDANEEVC LVRCTLHTGR THQIRVHMAS IRHPLVADVL YGGAMAGPMH RQALHAFRLA FVHPVTGAPL EFHAPLPEDM TQALDFWGLR YNRP
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