Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1068 |
Symbol | |
ID | 7382877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 1112958 |
End bp | 1114220 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643654383 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002552545 |
Protein GI | 222110281 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.27901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAACG CCCCCTCCGC CGCGCCGCTT CCACCCGCCC CCATCGCCAT GGCGCCGCGC GCCGCCCTGC TGATGCTGGT GGCGCTGACC TCGGGCTTCG CGTTGAGCTC GGCCTTTCGC ACCGTGGCCG CCATCATGGC CGCGCCGCTG CAGGCGGACT TCGGGCTGTC GCCGCAAGCG CTGGGGGTGT TCGCGGGCAC CTTCCATTTC GCCTTTGGCG CCATGCAACT CTTCATGGGC ATCGGCATCG ACCTGTATGG CGTGCGCCGC ACGATCCTGG CGGCGTTTCC GCTGTGTATC GCGGGGGCGC TGCTGTCGGC GCTGGCGCCG GGCTACGGCG CGCTGCTGCT GGGCCAGGCG CTGATCGGCG TGGGCTGCGC GCCGGCCTTC CTGGTGTGCA CGGTGTTCAT TGCACGGCAT TTCGCGCCGC AGCGCTTCGC GGCGATGTCG GGCATGGCGA TGGCGCTGGG TACGCTGGGC ATGCTGTTCA CCGGCACGCC GCTGGCCTGG CTGGTGCAGC AGTGGTCCTG GCGCGCGGGC TTCGTGGTGC TGGCGGCGCT GGCGCTGGCG GCTTGGCTGT GGATCTGGCG CAGCGTGCAT GAGCCCGTCG CCGCGCCGGC GCAGCAGGAG GCCCCGCGCG AGTCCGTGCG CGAGGCGGTG CTGCGCTTCG CCGCGCTGTT CACCGTGCCG CACACCTGGG GCATCGTGGT GCTGGGCGCG GTGACCTATG CGGCGCTCAT CTCCCTGCGC GGCCTGTGGC TGGGGCCCAT GCTGATCGAG CGCCACGGTT TCTCGCTGGT GCAAAGCGGC AACGTGGCGC TGGCCCTGTC GGTGGTGGCG CTGTGCGGGC CGATGCTGTT CGGCCGCATC GACCCCGGCC CCGCCCGGCG CCGCCGCTGG ATCGTGACCT GCACCCTGGC CATGGCGGTC CTGTTCGCGG CCATGGTGCT GCCGCACTCC GCCCTGCTGG ACGTGGCCTG CATGCTGGCC GTGGGGCTGC TGTCGGGCTT CATCGTGCTG CAGTACGCAG ACGTGCGCGC GGCCTACCCG GCGGCGCTCA CCGGGCGGGC CATGGCGGTG TTCACCATGG CCATGTTCCT GGGTGTGGCG GCCATGCAGT GGCTCACGGG GCTGGTGGCG TCCCTTGCCA AGCGCGGGGG GACGGACCCT TACCTGGCAG TGATGGCCAG CATCGCCGTG CTGCTCGCGT TGGCGGCGCT GGCGTTTCGG CTGCTGCCGC ATCCGCCGCA GGGTGAAAGA TAG
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Protein sequence | MPNAPSAAPL PPAPIAMAPR AALLMLVALT SGFALSSAFR TVAAIMAAPL QADFGLSPQA LGVFAGTFHF AFGAMQLFMG IGIDLYGVRR TILAAFPLCI AGALLSALAP GYGALLLGQA LIGVGCAPAF LVCTVFIARH FAPQRFAAMS GMAMALGTLG MLFTGTPLAW LVQQWSWRAG FVVLAALALA AWLWIWRSVH EPVAAPAQQE APRESVREAV LRFAALFTVP HTWGIVVLGA VTYAALISLR GLWLGPMLIE RHGFSLVQSG NVALALSVVA LCGPMLFGRI DPGPARRRRW IVTCTLAMAV LFAAMVLPHS ALLDVACMLA VGLLSGFIVL QYADVRAAYP AALTGRAMAV FTMAMFLGVA AMQWLTGLVA SLAKRGGTDP YLAVMASIAV LLALAALAFR LLPHPPQGER
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