Gene Dtpsy_1047 details

Gene Information

• Locus tag: Dtpsy_1047
• ID: 7382366
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 1088491
• End bp: 1089183
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643654362
• Product: transcriptional regulator, GntR family
• Protein accession: YP_002552524
• Protein GI: 222110260
• COG category: [K] Transcription
• COG ID: [COG1802] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCATAC TGACCAAGTT CCGCCTTGAC CGTTCGCGCC TGGCCGCCCC GCAGGTCTTC 
GAAAGCCTGC GCGAGGCCAT TCTGACGCTG GAGCTGGTGC CCGGCGCGAT GCTGGTGCGC 
AGCGACCTGG CCGGGCAATT CGGCGTGAGC CAGACGCCCA TCCGCGAGGC GCTGCTGCGC 
CTGGAAGAGG AGGGCCTGGT GGAAGTCTTT CCCCAGCACG CCACGCTGGT CAGCCGCATC 
GACGTGGCGG CCGCGCGCGA AGCGCACTTC CTGCGCCGCT CCATCGAGCT GGAGATCGTG 
CGCACGCTGG CGCTGCAGCC GCCCCCCGGC CTGGTGGTGC AACTGCAGGC GCAGTGCGCA 
CTGCAGGAAT CGCTGGCCGC CGCGCAGCGC TATGACGACT TTCTGGGAGC GGACCATGGC 
TTTCACCGCC TGATGTATGA GGCGGCCGGC GTCATGGGCC TGTGGGCGCT GGTGCGCCGC 
TACTCCGGCC ATGTGGATCG CTTGCGCCGC CTGCACCTGC CCACCGCAGG CAAGACGGGC 
GTCATCATGC GCCAGCATCG GGCCATCCTC GACGCCATTG ACCGGCAGAA CGCTCCCGCG 
GCCCAGGAGG CGTTGCGCGA GCACCTGTCG GGCACGCTCA GCGCGGTGGA CAACGTATGC 
GCCCAGCATC CGGATTACAT CCTGCAGGGT TAG 

 

Protein sequence

MPILTKFRLD RSRLAAPQVF ESLREAILTL ELVPGAMLVR SDLAGQFGVS QTPIREALLR 
LEEEGLVEVF PQHATLVSRI DVAAAREAHF LRRSIELEIV RTLALQPPPG LVVQLQAQCA 
LQESLAAAQR YDDFLGADHG FHRLMYEAAG VMGLWALVRR YSGHVDRLRR LHLPTAGKTG 
VIMRQHRAIL DAIDRQNAPA AQEALREHLS GTLSAVDNVC AQHPDYILQG