| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1034 |
|---|
| Symbol | |
|---|
| ID | 7382353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 1073361 |
|---|
| End bp | 1074848 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643654349 |
|---|
| Product | xanthine permease |
|---|
| Protein accession | YP_002552511 |
|---|
| Protein GI | 222110247 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2233] Xanthine/uracil permeases |
|---|
| TIGRFAM ID | [TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.581901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACGA ACGTTCATCC GGTTGACGAA AAACTGCCCT GGGGCCGCGC AGCCACGCTG
GGTCTGCAAC ATGTGCTGGT GATGTACGCA GGCGCGGTGG CGGTGCCGCT CATCGTGGGG
CGCGCGCTCA ACCTGCCGCC CGAGCAGGTA GCGCACCTGA TCTCTGCCGA CCTCTTCGTC
TGCGGGCTGG TCACGCTCAT CCAGGCCTGG GGTGCCACGC AGTGGTTCGG CATCAAGCTG
CCGGTGATGA TGGGCGTGAC CTTCGCGGCC GTGGCGCCCA TGGTGTCCAT GGCGCAAGCC
ACGGGCGGTC AGGCGGGCGC GGGGCTGATC TTTGGCGCGG TGATCGGGGC GGGCGTGGTC
TCGATGCTCA TCGCGCCGGT GATCAGCGGC CTGCTGCGGT TCTTTCCGCC GGTGGTCACG
GGCACCATCA TCGCGGTGAT CGGCATCAGC CTGATGCGCG TGGGCATCAA CTGGATCTTC
GGCAACCCCG TGGGGCCCAC GGCCCCGGCC GTTCCCAACC CGGAGCACCT CAAATGGCTG
GCCGAGGCCC AGGCCGCCGC CGGCGCGCCC GGCTCCTCGC TGCCGCCAGT GCCCAAGGGC
TTCGCCGTGG TGCCCACGCT GCCCAACCCG CGCTATGCCG ACCTGACAGG CGTGGGCATC
TCGGGCGTCG TCCTGCTCAC CATCTTGCTG GTGGCGCGCT TTGGCAAGGG CTTCTGGGCC
AACATTTCGG TGCTGCTGGG CATCATCGTG GGCGGGGTGG TCACTGCGTC CATGGGGCTG
ATGGACTTTC ACAAGGTGGC CCAGGCACAG TGGTTCGACA TGGTGCTGCC ATTCGAGATC
GCGCTGCCGG TGTTCGACCC CATCCTGATC CTGACCATGA CGCTGGTGAT GATCGTCGTG
ATGATCGAGT CCACCGGCAT GTTCCTGGCC CTGGGCGAGA TGACGGGGCG CGAGATCTCG
CGCGACGATC TCACGCGCGG CCTGCGCACC GACGGCCTGG GCACGCTGAT CGGCGGCCTC
TTCAACACCT TCCCCTACAC CAGCTTCTCG CAGAACGTGG GGCTGGTGGC CGTCACCGGC
GTCAAGAGCC GCTGGGTGTG CGTGGCCGGC GGCATGATCC TGATCGTGCT GGGCGTGCTG
CCCAAGATGG CGGCGCTGAT CGAGTCGCTG CCCACCGTGG TGCTGGGCGG CGCGGGGCTG
GTGATGTTCG GCATGGTGGC GGCCACGGGC ATCCGCATCC TGTCGAACGT GGACTTTCAG
AAGAACCGTA ACAACGCGAT GATCGTTGCG GTGTCCATCG GGGTGGGCAT GATCCCGCTG
ATCGCACCCA ACTTCCGCCA GTGGATGCCC CATGCCATCC ATCCGCTGAT CGAATCCGGT
ATTCTGCTGG CCTCGATCAC TGCCGTGGTC CTGAACATCT TCTTCAATGG AGCCAGCCGC
GACACCTCTG CGGCCGTGCT CGCCGCCCGG CAGGCCGACG CCCACTGA
|
|---|
| Protein sequence | MSTNVHPVDE KLPWGRAATL GLQHVLVMYA GAVAVPLIVG RALNLPPEQV AHLISADLFV
CGLVTLIQAW GATQWFGIKL PVMMGVTFAA VAPMVSMAQA TGGQAGAGLI FGAVIGAGVV
SMLIAPVISG LLRFFPPVVT GTIIAVIGIS LMRVGINWIF GNPVGPTAPA VPNPEHLKWL
AEAQAAAGAP GSSLPPVPKG FAVVPTLPNP RYADLTGVGI SGVVLLTILL VARFGKGFWA
NISVLLGIIV GGVVTASMGL MDFHKVAQAQ WFDMVLPFEI ALPVFDPILI LTMTLVMIVV
MIESTGMFLA LGEMTGREIS RDDLTRGLRT DGLGTLIGGL FNTFPYTSFS QNVGLVAVTG
VKSRWVCVAG GMILIVLGVL PKMAALIESL PTVVLGGAGL VMFGMVAATG IRILSNVDFQ
KNRNNAMIVA VSIGVGMIPL IAPNFRQWMP HAIHPLIESG ILLASITAVV LNIFFNGASR
DTSAAVLAAR QADAH
|
|---|
| |