Gene Dtpsy_0895 details

Gene Information

• Locus tag: Dtpsy_0895
• ID: 7384398
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 919689
• End bp: 920351
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643654210
• Product: SNARE associated Golgi protein
• Protein accession: YP_002552373
• Protein GI: 222110109
• COG category: [S] Function unknown
• COG ID: [COG0586] Uncharacterized membrane-associated protein

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAAGTCT TTGCGTTCCT GATCGATTTC ATCCTGCATG TGGACAAGCA TCTCGCCGCC 
TTCGTGGCCA GCTATGGCCC CTGGGTGTAC GCGCTGCTGT TCATCATCGT GTTCGTGGAG 
ACGGGCGTGG TGGTCATGCC CTTTCTGCCG GGTGACTCGC TGCTGTTCGT GGTGGGGGCG 
CTCAGCGGTG CAGGGTTGAT GAACTTCCCG CTGGCCTGCG CGGTTCTGCT GGCTGCGGCG 
ATCCTGGGCG ACCAGTGCAA CTACAGCATC GGGCGCTATT TCGGACCCAA GGTATTCCAG 
TGGGAAAGCT CGCGCTGGTT CAACAAGAAG GCCTTCGACC AGGCCCATGC GTTCTATGAG 
CGCTATGGCG GCATCACCAT CGTGCTGGCG CGCTTCATGC CCTTCATCCG CACGTTCGCT 
CCCTTCGTGG GCGGCGTGGC GGCCATGGGG CGGGGCAAGT TCACGGCCTA CAACGTCGGT 
GGTGCGGTAC TGTGGGTCGT GGGCATCTGC ACGGCGGGGT ACTTCTTTGG GAACATGGCC 
TGGGTGCAGC GGCATCTGGA CAAGATCATC TGGGCCATGA TCTTCATCCC CGGCCTGATT 
GCCATCTTTG GCGCATGGCG CGCCGGGCGC AAGGCACAGG GAACTGCGGT TGCTATTGAA 
TAG 

 

Protein sequence

MEVFAFLIDF ILHVDKHLAA FVASYGPWVY ALLFIIVFVE TGVVVMPFLP GDSLLFVVGA 
LSGAGLMNFP LACAVLLAAA ILGDQCNYSI GRYFGPKVFQ WESSRWFNKK AFDQAHAFYE 
RYGGITIVLA RFMPFIRTFA PFVGGVAAMG RGKFTAYNVG GAVLWVVGIC TAGYFFGNMA 
WVQRHLDKII WAMIFIPGLI AIFGAWRAGR KAQGTAVAIE