| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0888 |
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| Symbol | |
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| ID | 7384391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 911888 |
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| End bp | 913690 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643654203 |
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| Product | ABC transporter related |
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| Protein accession | YP_002552366 |
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| Protein GI | 222110102 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGGT CCACCAACGC TCAGAAAAAA CCCCAGGACA TGCGCCACCT GATGAGGGAA
CTGGCGCCGT TCCTGCGTCC CTATCGGATA CACCTCGCTG GCGCGATGGC GTTTCTGCTG
CTCGCCGCCT TGGCAACGCT GGCCTTTCCC ACGGCCCTGC GTCAATTGAT CGATGGTGCG
ATTAGCGCTG CCACCCCGGG GGGAAAGGGC GTCGGCGCAC CGGCCTTGCG CACGCACTTT
GCAGTGCTGT TCGCGGTCGC CGTGGCACTT GGATTGGCGT CGGCCGCACG CTACTACCTC
ATGAGCTGGC TGGGCGAACG CGTCACGGCA GATCTGCGCA ACGCCGTCTA CGCACACGTG
CTGCGGCAGA GCCCGGAGTT CTTTGAAACC ACGCAAACGG GGGAAGTGCT GTCGCGCCTC
ACGGCCGACA CGACACTGGT GCAGACCGTC GTGGGCTCAT CGCTGTCCAT GGGGCTGCGC
AATGCCGTGC TGGGCGCCGG GGCGCTGGGC ATGCTGATCT GGAGCACACC CTACGTGATG
GCGCTCGCCT TCGGGGCCAT CGTCGCCATC GTGCTGCCGT CGATGTGGAT CGGACGGCGT
GTACGGCGTC TGTCACGCGC AAGCCAGGAC CGCGTGGCAG ATGCCAGCGC CATCGCCGCA
GAGGTGTTGG GCGCCATTCC CGTGGTGCAA AGCTACACGG CTGAAGCACG CGAAGCCGCC
CGCTTCGCGG CGGCTACGGA GAGTGCGCTG CGTGCAGCCC TGCGCCGCAG CGGCGCCCGT
GCAGCGCTGA TGGCCTTCAT CATCATTGCC AGCGCCGCGC TGTTGCTGTG GGGGTTGTAT
CTCGGAGCCC AGGCGGTCCT TGCAGGGACG CTCTCGGCCG GGCAACTGGG GCAGACCATT
CTCTATGCGA TGTTTCTCGC GGGTGCCGTA GCCGTGCTGG GCGAGGTCTA TGGCGACCTG
TTGCGCGCCG CGGGTGCGAT GGAGCGGCTG ATGGAACTGC TCGCAACACG CCCCACGCTT
GCCGCACCAT CCCGGCCCGC CATGCCGCGG GCCACAGACC TTTCGATCGA GTTCACGGGC
GTAGGCTTCT CCTATCCCTC GCGCCCCGTG CCACCCGCGC TGCGCCACTT CGACCTGCGC
CTGCTGCCAG GAGAAACCGT TGCGTTGGTG GGCAGCAGCG GCGCCGGCAA GTCCACCGTC
TTTCAATTGC TGCAACGCTT CTACGACGTG AGCGAGGGCC GCATCACGTT GGGTGGCGTG
GATTTGCGCG ACATGGACCC GCAGGTGCTG CGAAGCCACA TTGGCGTGGT TCCGCAAGAC
GCCGAGATTT TTTCCGCATC GGCCCTGGAC AATATCCGCT ATGGCGATCC GCAGGCGAGC
CGGCACGCGG TGGAAGCAGC GGCACGCGCC GCATTTGCCC ATGAATTCAT CGACGCGCTG
CCGCAGGGGT ACGACACCTT TCTCGGCGAG CATGGCGTGC GCCTCTCAGG AGGCCAACGC
CAGCGCATTG CCATAGCCCG CGCGCTGCTG AAGAACGCCC CCGTACTGCT CCTGGACGAG
GCCACAAGCG CCCTGGACGC GCACAGCGAG CGTGCCGTGC AGCTTGCGCT GGACACCGCG
CTTCGCCAGC ATTCCCGCCA ACGTATTACC CTGGTCATCG CCCACCGGCT GGCCACCGTC
CAGCATGCGG ACCGCATTGT GGTCATGGAC CATGGAAGCA TGGTCGAGCA GGGGCGGCAC
GAGGACTTGC TGCATCAGGG CGGCGTCTAT GCCCGCTTGG CAGCGCTGCA GTTCTCGCGT
TGA
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| Protein sequence | MARSTNAQKK PQDMRHLMRE LAPFLRPYRI HLAGAMAFLL LAALATLAFP TALRQLIDGA
ISAATPGGKG VGAPALRTHF AVLFAVAVAL GLASAARYYL MSWLGERVTA DLRNAVYAHV
LRQSPEFFET TQTGEVLSRL TADTTLVQTV VGSSLSMGLR NAVLGAGALG MLIWSTPYVM
ALAFGAIVAI VLPSMWIGRR VRRLSRASQD RVADASAIAA EVLGAIPVVQ SYTAEAREAA
RFAAATESAL RAALRRSGAR AALMAFIIIA SAALLLWGLY LGAQAVLAGT LSAGQLGQTI
LYAMFLAGAV AVLGEVYGDL LRAAGAMERL MELLATRPTL AAPSRPAMPR ATDLSIEFTG
VGFSYPSRPV PPALRHFDLR LLPGETVALV GSSGAGKSTV FQLLQRFYDV SEGRITLGGV
DLRDMDPQVL RSHIGVVPQD AEIFSASALD NIRYGDPQAS RHAVEAAARA AFAHEFIDAL
PQGYDTFLGE HGVRLSGGQR QRIAIARALL KNAPVLLLDE ATSALDAHSE RAVQLALDTA
LRQHSRQRIT LVIAHRLATV QHADRIVVMD HGSMVEQGRH EDLLHQGGVY ARLAALQFSR
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