| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0827 |
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| Symbol | |
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| ID | 7383522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 857273 |
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| End bp | 858997 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643654139 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002552305 |
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| Protein GI | 222110041 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0963387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCGG CCATGGCCCA GACGCCTGCC CAGTCCACCG TCCCCGCCCC CCCAGCCGAG
CTGGAAGATA CCGATGCGGC TGCCAGCGAC GATGCAGCCG CCTTGAATGC CGAGCTGTTC
TACGAATTGC TGCTGGGCGA GATGACCACC AGCCGGGGCG ACCCCGGCAC CGGTTATGCC
CTGATGCTGG ACGCTGCACG TCGCAGCGGC GACCCACAGT TGTACCGCCG CGCCACCGAG
ATCGCCCTGC AGTCGCGCTC GGGCGAATAC GCCTTGATGG CCGCGCGTGC GTGGAAGGAG
GCCCTGCCGC AGTCGCGCGA TGCCAATCGC TACATGTTGC GCATCCTGGT CGCCCTCAAT
CGCATCGGCG ATAGCGCCGA ACCCTTGAAG CAGGAACTGA GCACCGCGCC GACGCGCGAC
AAGATATCCA CCATCCGCGC GCTGCCTCAG CTCTATGGCC GTGCCAGCGA CAAGGCACTG
GCCGCGCAGG TGGTGCGCCA GGCCCTGCAG GCAGAACTGA ACCACCCGGC CATCGGCCCC
ATTGCCTGGA CCACCGTGGG GCGCATGGAC CTGGCAGCCA GCGACAAGGC GGGCGCCCTG
GAGGCGGCGA GCCAGGCCCA TGCACAAGAC CCTGCCGACG ATGGCGCCGC CATGCTGGCG
CTCGAGCTGC TCGCAGAGGG CGTCACGCAG GCGGAGCCGC TGCTCGCGGG TTACCTGGCC
GGCAAGCCCC TACCCGAAGT CCGCATGGCC TACGCACGCC TGCTGCTGGA GTCTCAGCGC
CTGGCCGACG CACAGTTCCA ACTGGATGCA GTCAATCGCG AACAGGCCGA CATGCCCGAA
GCCTGGTTGT TGCAGGCGTC GCTACACCTG CAAGGCGGAC GGCTGGAGCA GGCGGAGGAA
GCACTGCGGC GTTTTACTGG CTTGCTCGAA GACCTGCCCG CCACGCCCCA ACGCAAGCGC
GCGCTCACCC AGGCATATCT GATGCACGCG CAAGTAGCGG AGAAGCGTGG CGACTACGCC
GGGGCCGAAG GTTGGCTTTC GCGCATTGAA GATGCCGCCG AACTGCTCAC GGCTCAAAGC
CGCCGCGCTG CACTGCTCGT ACGCCAGGGC AAATTGGAAG AGGCGCGCGC ACTGATCCGC
GCCGTGCCCG CAAGCACCCC GGATCAGGAA CGCCTCAAGT TGCAGGCCGA AGCCCAGTTG
CTGCGCGAAG CAAAACAATA TGCACAGGCC TACACGGTCC TCGGCAAGGC CGTAGCGCTG
GCGCCCGCGG ACAACGACCT CGCCTACGAC CAAGCCATGC TGGCGGAAAA GGCGGGCCGC
CTCGACGACA TGGAACGCCT CTTGCGCGCC ATCATCGCCC GCCAACCCGA CTACCACCAC
GCACTCAATG CCCTGGGTTT TTCCCTCGCA GAGCGGGGCG TACGGCTGGA GGAAGCTAAG
GCGCTCATCG TCAAAGCGCT TGAGTTTGCA CCGAACGATC CGTTCATCAC CGACAGTCTG
GGCTGGGTGG AATTCCGCCT GGGCAACCGC CAGGAAGCGC TGACCATCCT GAAACGCGCC
TACGAAACAC AACCGGACGC AGAGATAGCG GCCCACATCG GCGAAGTTCT GTGGTCTCTG
GGAGAACATG ACCGCGCGCG TGACATCTGG CGCGAGGGCC TGCGTATCAA CAAAGACAAC
GACACACTCA AGGGCACGCT CGACCGGCTG GGAGTGCGTC TGTGA
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| Protein sequence | MLPAMAQTPA QSTVPAPPAE LEDTDAAASD DAAALNAELF YELLLGEMTT SRGDPGTGYA
LMLDAARRSG DPQLYRRATE IALQSRSGEY ALMAARAWKE ALPQSRDANR YMLRILVALN
RIGDSAEPLK QELSTAPTRD KISTIRALPQ LYGRASDKAL AAQVVRQALQ AELNHPAIGP
IAWTTVGRMD LAASDKAGAL EAASQAHAQD PADDGAAMLA LELLAEGVTQ AEPLLAGYLA
GKPLPEVRMA YARLLLESQR LADAQFQLDA VNREQADMPE AWLLQASLHL QGGRLEQAEE
ALRRFTGLLE DLPATPQRKR ALTQAYLMHA QVAEKRGDYA GAEGWLSRIE DAAELLTAQS
RRAALLVRQG KLEEARALIR AVPASTPDQE RLKLQAEAQL LREAKQYAQA YTVLGKAVAL
APADNDLAYD QAMLAEKAGR LDDMERLLRA IIARQPDYHH ALNALGFSLA ERGVRLEEAK
ALIVKALEFA PNDPFITDSL GWVEFRLGNR QEALTILKRA YETQPDAEIA AHIGEVLWSL
GEHDRARDIW REGLRINKDN DTLKGTLDRL GVRL
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