Gene Dtpsy_0768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_0768 
Symbol 
ID7383707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp795776 
End bp797509 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content55% 
IMG OID643654079 
Producttype IV-A pilus assembly ATPase PilB 
Protein accessionYP_002552247 
Protein GI222109983 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID[TIGR02538] type IV-A pilus assembly ATPase PilB 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCTA TCGACACACA GAAAGAAGCT CAACCCATTG CCTTACCCGG ACTGGCGCGC 
GCGTTGATGT CGGTGGGCAA ATTGGATCAA AAAGCGGCGG AAGAGATTTA CAAAAAGTCA
CAAAATAGCC GCAGTAGCTT TATTGCAGAG CTCACGGAAT CGAAAATCAT CACGCCAAGT
GATCTGGCCC ATACGGTATC CACCGTATTT GGTGCCCCCT TGCTAGATGT CGATGCGATC
GACCGGCAGC GCATCCCCAA AGACCTGTTG GACGTCAAAC TGTGCCAGTC CTACAAAGTC
ATCGCTCTCA GTAAGCGCAA TAACCGGCTC ATCGTCGCCA CCGCGGATCC GACATTTCAA
GAGGCCGCAG AAAAGATCAA GTTCACCACA CAAATGGGGG TGGACTGGAT CATCGCGGAA
TATGACAAGC TGCTCCGCTT GATTGAGGCG AGCACGAAGA GCGGTACAGA AACGCTCGAC
GGCATTAACA GTAGTAATGA TTTTGAGTTC GGCGACATTC CCGTTGATGA AGCTCCGGAC
GAGGATGCCG ACAATCCCGC GGAAGTCGAG GATGCTCCCG TTGTCAAATT TCTGCACAAG
ATGCTGTTGG ATGCTTTCAA TATGCGTGCA TCCGATCTGC ATTTTGAGCC CTACGAGCAC
CATTACCGTG TCCGCTTCCG CATAGATGGC GAATTGCGCG AAATCGCATC GCCGCCTATT
GCCATCAAGG AGAAGCTGGC CTCGCGCATC AAGGTGATCT CCCGCCTGGA TATTTCGGAA
AAACGCGTGC CCCAGGATGG CCGCATGAAG CTCAAGGTTG GGCCGGACCG GGTTATCGAT
TTCCGCGTCA GCACCCTGCC TACGCTCTTT GGCGAGAAGA TCGTGATCCG TATTCTCGAT
CCGAGCAGCG CCAAGCTGGG TATTGACGCA CTGGGATATG AGCCCGAGGA AAAGGAGCGT
TTGCTGCAGG CCATCAACCG CCCTTATGGA ATGATCTTGG TGACCGGACC CACGGGCTCC
GGGAAGACCG TATCGCTCTA CACATGTCTC AATCTGTTGA ACAAGCCCGG CGTCAATATT
GCGACCGCTG AGGACCCTTC GGAAATCAAC CTCCCGGGTG TGAACCAAGT CAACGTCAAC
GAGAAAGCCG GCCTCACGTT TGCCGTCGCG CTTAAGTCAT TCCTTCGCCA AGATCCGGAC
ATCATCATGG TGGGTGAAAT CCGGGATCTG GAAACGGCAG ACATTTCAAT CAAGGCCGCG
CAGACGGGTC ACTTGGTGCT CTCTACCCTG CACACCAATG ACGCTCCCAC GACATTGACG
CGCATGCGCA ATATGGGCAT CGCGCCCTTC AATATCGCAT CCAGCGTGAT TCTTATTACG
GCGCAGCGAC TGGCGCGTCG CTTGTGCCCC AATTGCAAGG CGCCCGTGGA CATTCCGCAT
GAGACGCTGC TGGAGGCCGG CTACCGGGAC GAGGAGATCG ACGGCTCATG GGTTACCTAC
CGACCGGTGG GCTGCTCCGC CTGCAATAAC GGATACAAGG GGCGCGTGGG CATTTACCAG
GTCATGCCGG TGTCCGAAGA AATCCAGCGC ATCATCCTGC GCGATGGAAG CGCACTGGAA
ATTGCCGAAC AGGCACGCCT GGAAGGCGTC CGTTCTCTGC GTGAATCCGG GCTTCACAAG
GCAAAAATGG GGTTGACCTC GTTGGAAGAG GTCTTGGCTG TCACCAACGA ATAA
 
Protein sequence
MAAIDTQKEA QPIALPGLAR ALMSVGKLDQ KAAEEIYKKS QNSRSSFIAE LTESKIITPS 
DLAHTVSTVF GAPLLDVDAI DRQRIPKDLL DVKLCQSYKV IALSKRNNRL IVATADPTFQ
EAAEKIKFTT QMGVDWIIAE YDKLLRLIEA STKSGTETLD GINSSNDFEF GDIPVDEAPD
EDADNPAEVE DAPVVKFLHK MLLDAFNMRA SDLHFEPYEH HYRVRFRIDG ELREIASPPI
AIKEKLASRI KVISRLDISE KRVPQDGRMK LKVGPDRVID FRVSTLPTLF GEKIVIRILD
PSSAKLGIDA LGYEPEEKER LLQAINRPYG MILVTGPTGS GKTVSLYTCL NLLNKPGVNI
ATAEDPSEIN LPGVNQVNVN EKAGLTFAVA LKSFLRQDPD IIMVGEIRDL ETADISIKAA
QTGHLVLSTL HTNDAPTTLT RMRNMGIAPF NIASSVILIT AQRLARRLCP NCKAPVDIPH
ETLLEAGYRD EEIDGSWVTY RPVGCSACNN GYKGRVGIYQ VMPVSEEIQR IILRDGSALE
IAEQARLEGV RSLRESGLHK AKMGLTSLEE VLAVTNE