| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0666 |
|---|
| Symbol | |
|---|
| ID | 7384171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 690685 |
|---|
| End bp | 692256 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643653977 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_002552146 |
|---|
| Protein GI | 222109882 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.404568 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAATA TGGCCCTGGC GCTTGTACTG CAAGCGCTAG CAGCTATATT TTTGGTAGCT
AATGCGCAAA CCATCCGTGT GGCCAACCAG GGCGATGCGC TGTCGATGGA CCCACATGCG
CTCAATGAAT CGCTGCAGCT CAGCCTGACC GGCAATGTGT ATGAGCCTCT GGTGGGACGC
AACAAGGATC TGAGCCTGGT GCCTGCGCTG GCGCTGGCCT GGCGTGCGAC CACCCCCACC
GTGTGGCGCT TCGAGTTGCG CCGCGGCGTG TCCTTCCACG ACGGTGCGCT TTTCACGGCC
GACGATGCGG TGTTTTCGCT GCGGCGCGCG CAGTCCGAAG GCTCGGACAT GCGCAGTTAC
CTGAGCGGCG TGCGCGAGGT GCGCAAGTTG GACGCGCACA CCATCGAGAT CGAAACCCGC
GAGCCCACGC CGCTGCTGCC GGCCCTGCTG TCGCACGTCT ACATGATGAA CCAGCGCTGG
AGCGAGGCGC AGGGTCTCGC GCAGGTAGGC GACGCGCGCG GGGCCGCGGG GCAGGCCGCC
GCGCTGCGCG CCAATGGCAC GGGGCCGTTC CGCCTGGCCG AGCGTCGCCC GCAGCAGCGC
ACCGTGTTCG AGCGCAACAT GCGCTACTGG GGCACTATCG AGAGCAACGC ACGCCAAGTC
GTCTTCCTGC CCATTCCGGA CAACGAGGCG CGCGTGGCCG CGCTGCTGGC CGGCCGCGTG
GACGTGATGG AGCCCGTGCC GGTACAGGAC ATCGAACGCG TGAGCGCCGC CGGACTGGTC
CGCGTGGTCA CGGGGCCCGA GTTGCGCACG CTGTTCCTGG GCATGGACCA GCACAGCGAC
GAGCTGCCGT ACGCCAGCGT GCGCGGCGCC AACCCCTTCA AGGACCGGCG CGTACGCCAG
GCCTTCTACC AGGCCATCGA CATCGATGCG CTCATCAAGA ACGTGATGCG CGGCGCCGCC
ACGCCCGCCG CGCTCATCGT GGGACCGGGC GTCAATGGCT TTCAGTCCGA CGTCAAGCGG
CTGCCGCACG ACGTGGCGGC CGCGCGCGCG CTCATGGCGC AGGCCGGCTA TGGCGAGGGC
TTCGCGCTCA CGCTGGACTG CCCCAGCGAC CGCTATGTGA ACGACGCGGC GCTGTGCACC
GCCATCGCTG CACAGCTGGC GACCCTGCAG GTGCGCGTGA CGGTGCGCGC GGAGCCCAAG
GCGCAGTACT ACCCGCGCAT CCTGCGACGC GACGCGGGCT TCTACCTGAT GGGCTGGACG
CCCTCCACCT ACGACGCACA CGGTGCGCTG AACGCGCTGG CGGCCTGCCC GCGCGGCGAA
GGCGCGGGCC ACTTCAACCT GGGGGGCTAT TGCAACCCGC GGCTGGACGC GCTGCTGCTG
CAGGTCCAGA CGCAGACCGA CAAGACCCGG CGCGATGTGC TGCTGCGCGA GGCTTTGCTG
CTGCAGGCCG CCGACATTGC CTACATCCCG CTGCACCAGC AGGCCCTGGC CTGGGGCGTG
TCCAAGAAGA TCCGCCTGGT GCAGATGGCC GACAACACCA TGCCTTTCAA GTGGATGGGC
GTGGGCCCCT GA
|
|---|
| Protein sequence | MRNMALALVL QALAAIFLVA NAQTIRVANQ GDALSMDPHA LNESLQLSLT GNVYEPLVGR
NKDLSLVPAL ALAWRATTPT VWRFELRRGV SFHDGALFTA DDAVFSLRRA QSEGSDMRSY
LSGVREVRKL DAHTIEIETR EPTPLLPALL SHVYMMNQRW SEAQGLAQVG DARGAAGQAA
ALRANGTGPF RLAERRPQQR TVFERNMRYW GTIESNARQV VFLPIPDNEA RVAALLAGRV
DVMEPVPVQD IERVSAAGLV RVVTGPELRT LFLGMDQHSD ELPYASVRGA NPFKDRRVRQ
AFYQAIDIDA LIKNVMRGAA TPAALIVGPG VNGFQSDVKR LPHDVAAARA LMAQAGYGEG
FALTLDCPSD RYVNDAALCT AIAAQLATLQ VRVTVRAEPK AQYYPRILRR DAGFYLMGWT
PSTYDAHGAL NALAACPRGE GAGHFNLGGY CNPRLDALLL QVQTQTDKTR RDVLLREALL
LQAADIAYIP LHQQALAWGV SKKIRLVQMA DNTMPFKWMG VGP
|
|---|
| |