| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0499 |
|---|
| Symbol | ruvB |
|---|
| ID | 7382790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 517051 |
|---|
| End bp | 518121 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643653811 |
|---|
| Product | Holliday junction DNA helicase RuvB |
|---|
| Protein accession | YP_002551980 |
|---|
| Protein GI | 222109716 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
|---|
| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.456698 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCC ATACCGACGA CTTTGCCCCC TCTCCCCCTC CGGCGCGCGA GCGCGTGGTG
TCGGCCGCGC CGGCCTCCTC ACAGGAGGAA GCGCTGGAGC GTGCGCTGCG CCCCAAGCTG
CTGCAGGAGT ACGTGGGCCA GGCCAAGGCG CGCGAACAGC TCGAGATCTT CATCGGCGCG
GCCAAGAAGC GCGGCGAGGC GCTGGACCAT GTGCTGCTGT TCGGCCCGCC GGGCTTGGGA
AAAACCACGC TCAGCCACAT CATCGCCACC GAACTGGGCG TGAACCTGCG CCAGACCAGC
GGCCCCGTGC TGGAAAAGCC CAAGGATCTG GCAGCGCTGC TCACCAACCT GGAACGCAAC
GACGTTCTCT TCATCGACGA GATCCACCGC CTTTCGCCCG TGGTCGAGGA AATCCTCTAC
CCCGCGCTGG AGGACTACCA GATCGACATC ATGATCGGCG AGGGGCCGGC CGCGCGCAGC
ATCAAGCTGG ACCTGCAGCC CTTCACGCTG GTGGGCGCCA CCACGCGCGC GGGCATGCTC
ACCAACCCGC TGCGCGACCG CTTCGGCATC GTTGCGCGGC TGGAGTTCTA CACGCCCGAG
GAATTGGCGC GCATCGTCAT GCGATCGGCC GGCCTGCTGG GCGCGCCCAT CGACGCCGAG
GGCGGCATGG AAATCGCGCG CCGCTCGCGC GGCACGCCGC GCATCGCCAA CCGCCTGCTG
CGCCGCGTGC GCGACTATGC CGAGGTGAAG GGATCGGGCC ACATCACCCT GGACATTGCC
AACCGCGCGC TGACCATGCT GGACGTGGAT CCGCAGGGCT TCGACGTGAT GGACCGCAAG
CTGCTGGAGG CCGTGGTGCA TCGCTTCGAC GGCGGCCCCG TGGGACTGGA CAACATTGCC
GCCAGCATCG GCGAGGAGAG CGGCACCATC GAGGACGTCA TCGAGCCCTA CCTGATTCAG
CAGGGCTATC TGCAGCGCAC CCCGCGCGGG CGCGTGGCCA CGCTGGCCGC CTACCGCCAC
CTGGGCGTGG CGCCGCCGCG CGCCGCGGGC GGGCTGTTCG AGTCCGCCTG A
|
|---|
| Protein sequence | MTIHTDDFAP SPPPARERVV SAAPASSQEE ALERALRPKL LQEYVGQAKA REQLEIFIGA
AKKRGEALDH VLLFGPPGLG KTTLSHIIAT ELGVNLRQTS GPVLEKPKDL AALLTNLERN
DVLFIDEIHR LSPVVEEILY PALEDYQIDI MIGEGPAARS IKLDLQPFTL VGATTRAGML
TNPLRDRFGI VARLEFYTPE ELARIVMRSA GLLGAPIDAE GGMEIARRSR GTPRIANRLL
RRVRDYAEVK GSGHITLDIA NRALTMLDVD PQGFDVMDRK LLEAVVHRFD GGPVGLDNIA
ASIGEESGTI EDVIEPYLIQ QGYLQRTPRG RVATLAAYRH LGVAPPRAAG GLFESA
|
|---|
| |