Gene Dtpsy_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_0398 
Symbol 
ID7385406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp403487 
End bp404479 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content60% 
IMG OID643653712 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_002551882 
Protein GI222109618 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACCA ATTTGCTGAA ACCCAAGGCA ATCAATGTCG AGCAACTTGG CCCCAACCGT 
GCCAAGGTGG CGTTGGAGCC TTTTGAGCGC GGTTACGGGC ACACGCTGGG CAATGCCATT
CGCCGTGTAC TGCTCTCTTC CATGGTGGGT TACGCAGCAA CGGAGGTGAC GATTGCCGGT
GTCTTGCACG AATACTCGTC CATTGATGGC GTTCAGGAGG ATGTGGTCAA CATCCTGCTC
AACCTCAAGG GGGTGGTGTT CAAGCTGCAC AACCGTGACG AAGTCACGCT GAGCCTGCGC
AAGGATGGCG AAGGCGTCGT CACGGCGCGC GACATCCAGA CGCCGCACGA CGTTGAAATC
GTGAACCCCG AGCACGTCAT TGCCACTCTG TCTGCGGGCG GCAAGCTGGA CATGCAGATC
AAGGTGGAGA AGGGCCGCGG CTACGTGCCC GGCAACCTGC GCCGCTACGC GGACGAGGCG
ACGAAGTCCA TTGGCCGTAT CGTGCTGGAT GCTTCCTTCT CGCCGGTCAA ACGCGTGAGC
TATACCGTCG AGAGCGCGCG TGTGGAACAG CGCACGGACC TGGACAAGCT CGTCGTCGAG
ATCGAAACCA ACGGCGCTAT TACTGCCGAG GACGCGGTCC GCGCTTCCGC CAAGATTCTG
GTGGAACAAC TGGCAGTGTT CGCGCAGTTG GAAGGCGGTG AGTTGGCAGC TTTCGATGCG
CCGGCAAGCT CTCGCGGCGC TGCGACCTTC GATCCGATCC TGCTGCGTCC TGTGGACGAA
CTGGAACTCA CCGTTCGCTC CGCCAACTGC CTCAAGGCGG AGAACATCTA TTACATCGGT
GATCTGATTC AGCGAACCGA GAATGAACTG CTGAAGACGC CGAACCTGGG TCGCAAGTCG
CTCAACGAGA TCAAGGAAGT GCTCGCTTCG CGCGGCCTGA CCCTGGGTAT GAAGCTCGAG
AACTGGCCTC CGGCAGGGCT CGACAAGCGT TAA
 
Protein sequence
MQTNLLKPKA INVEQLGPNR AKVALEPFER GYGHTLGNAI RRVLLSSMVG YAATEVTIAG 
VLHEYSSIDG VQEDVVNILL NLKGVVFKLH NRDEVTLSLR KDGEGVVTAR DIQTPHDVEI
VNPEHVIATL SAGGKLDMQI KVEKGRGYVP GNLRRYADEA TKSIGRIVLD ASFSPVKRVS
YTVESARVEQ RTDLDKLVVE IETNGAITAE DAVRASAKIL VEQLAVFAQL EGGELAAFDA
PASSRGAATF DPILLRPVDE LELTVRSANC LKAENIYYIG DLIQRTENEL LKTPNLGRKS
LNEIKEVLAS RGLTLGMKLE NWPPAGLDKR