| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0382 |
|---|
| Symbol | |
|---|
| ID | 7385390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 394369 |
|---|
| End bp | 395967 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643653696 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_002551866 |
|---|
| Protein GI | 222109602 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000868135 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAGCG ACACCTCCAC CCCTTTGGCA ACCGTACGGG CCGACCTGTT GGCCCGCCTG
GCTCAACCCG TGACCTACGA CCTGGCGGTC GTCGGAGGTG GGGCGACGGG CCTGGGGGTG
GCGCTGGATG CGGCGGCGCG CGGCTTTTCC GTCGTGCTGC TGGAATCGCA CGACTTCGCC
AAGGGCACCT CCTCGCGTGC CACCAAGCTG GTGCACGGCG GCGTGCGCTA CCTCGCGCAG
GGCAACATCG CCCTGGTGCG CGAGGCGCTG CACGAGCGCA CCACGCTGTT GCGCAACGCC
CCCCATCTGG CGCAGCCGTT GGCATTCGTC ATGCCTTCTT ACAAGGTGTG GGAAACGCCG
TTCTACGGTG TGGGCCTGAA GATGTACGAC GCCCTGGCCG GCAAGGCGGG CCTGGGGCCT
ACCGAATTCC TTGGGCGCAT GGAAACCCTG CGCTGCCTGC CCACGGCCAT GGCCGACGGG
CTCAAGGGCG GCGTGAAGTA TTGGGACGGG CAGTTCGACG ACGCCCGACT GGCCCTGGCC
CTGGCGCGTA CCGCCGCGCA GCGGGGGGCT CTGCTGCTCA ACTACTGCCC CGTGGATGAC
CTGTTGTACG ACGGGGGGAA GGTGGCGGGC GTGGTTTGCC AGGATGCCGA GACCGGGCAG
CGCTACGAGG TGCGCGCGCG CTGCGTGGTC AACGCCACCG GCGTGTGGGT GGACGCCCTG
CGCCAGCGCG ATGGCGATGT GAGCGGCCAG CCCGCCAAGC CCATGGTGGC GCCCAGCCAG
GGGGTGCATA TCGTGGTGGA CCGCGAGTTC TTGCCCTCCG ACCATGCGCT GATGGTGCCC
AAGACGGCCG ACGGGCGGGT GCTGTTTGCG GTGCCCTGGC TGGGCAAGGT GATTTTGGGC
ACGACCGACA GCCCACGCCA GGATCTGGCG CGCGAGCCCC AGGCCATGCG GGAGGAAGTG
GCCTTCATCC TGGGGGAATC GGCGCGCTAC CTGCGGCGCG CCCCCCAGGC TAGCGATGTG
CGCAGCATCT GGGTGGGCCT GCGTCCCTTG GTCAAGCCCT CGGACGAAGA CGCCGCCGCC
ACCAAGAGCA TCAGCCGGGA ACACACCGTG CTGGCCAGCC GCAGCGGGCT GGTCACCGTG
ACTGGCGGCA AGTGGACCAC CTACCGCGCC ATGGCCGAGG ATGTACTGCT CAAGTGCATG
GACGAACACC TGCTGCCGCG CCGCCCGGGC GGGATCACCG TTGCGCTGCC CCTGGTAGGA
GCCGGTGCCA CCCGGGAGCG CCAGGGAATG AACGCGCCCC AGGGGCTGCA TTCCTACGGT
GACGAGGCCG CGCGGGTGCA AGCCCTTCCG GGTTCGCAGG TGCAACTGGC CGAAGGGCTC
AGCGAGGCCA TGGTGCGCTT TGCCGCGCGC CATGAGTACG CACGCACCGT GGAGGACGTG
CTCGCACGGC GCTCGCGCGT GCTGTTTCTC GATGCGCGCC TGGCGGCCGC GCTGGCGCCG
CGCGTGGCGG ACATCCTGCG CGAGGAAATC CCCGGCCAGG ACCCGCAGCT GCCCGCGTTC
CTGGAGTTGG CCGCACACTA CGCCACGGTG CCGGTATAA
|
|---|
| Protein sequence | MTSDTSTPLA TVRADLLARL AQPVTYDLAV VGGGATGLGV ALDAAARGFS VVLLESHDFA
KGTSSRATKL VHGGVRYLAQ GNIALVREAL HERTTLLRNA PHLAQPLAFV MPSYKVWETP
FYGVGLKMYD ALAGKAGLGP TEFLGRMETL RCLPTAMADG LKGGVKYWDG QFDDARLALA
LARTAAQRGA LLLNYCPVDD LLYDGGKVAG VVCQDAETGQ RYEVRARCVV NATGVWVDAL
RQRDGDVSGQ PAKPMVAPSQ GVHIVVDREF LPSDHALMVP KTADGRVLFA VPWLGKVILG
TTDSPRQDLA REPQAMREEV AFILGESARY LRRAPQASDV RSIWVGLRPL VKPSDEDAAA
TKSISREHTV LASRSGLVTV TGGKWTTYRA MAEDVLLKCM DEHLLPRRPG GITVALPLVG
AGATRERQGM NAPQGLHSYG DEAARVQALP GSQVQLAEGL SEAMVRFAAR HEYARTVEDV
LARRSRVLFL DARLAAALAP RVADILREEI PGQDPQLPAF LELAAHYATV PV
|
|---|
| |