Gene Dtpsy_0381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_0381 
Symbol 
ID7385389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp392534 
End bp394267 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content65% 
IMG OID643653695 
Productextracellular solute-binding protein 
Protein accessionYP_002551865 
Protein GI222109601 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000205955 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATGC AGTTCAAGGC GATCGCGTTC GCCGCCGCGG CGCTGGCGCT GGGGCAGGCA 
GCCTGGGCCG GCGAGGCCGA GGCCAAGAAG TGGATCGACA GCGAGTTCCA GCCCTCCACG
CTGAGCAAAG ACCAGCAGAT GGCCGAGATG AAGTGGTTCA TCGACGCGGC CAAGAAGCTG
CAGGCCAAGG GCGTGAAGGA GATCGCGGTG GTCTCCGAGA CCATCACCAC GCACGAGTAC
GAATCCAAGA CCCTGGCCAA GGCGTTCAGC GAGATCACGG GCATCCAGGT CAAGCACGAC
CTGATCCAAG AGGGCGACGT GGTCGAGAAG CTGCAGACCT CCATGCAGTC GGGCAAGTCC
ATCTATGACG GCTGGATCAG CGACTCCGAC CTCATCGGCA CCCACTACCG CTACGGCAAG
ATCCTGAACC TGTCCGACTA CATGGCCGGC CCGGGCAAGG ACTACACCAA CCCCGGCCTG
GATCTGCAGG ACTTCATCGG CACCAAGTTC ACCACCGCCC CGGACGGCAA GCTGTACCAG
CTGCCCGACC AGCAGTTCGC CAACCTGTAC TGGTTCCGCG CCGACCTGTT CGACCGCAAA
GACTTGAAGG ACAAGTTCAA GGCCAAGTAC GGCTACGACC TGGGCGTGCC GCTGAACTGG
TCTGCCTATG AAGACATCGC CGAGTTCTTC ACCAATGACG TGAAGCAGAT CGACGGCAAG
CCCATCTACG GCCACATGGA CTACGGCAAG AAGGACCCGT CGCTGGGCTG GCGCTTCACC
GACGCCTGGC TGTCCATGGC CGGCAGCGCC GACATCGGCA CGCCCAACGG CCTGCCCATC
GACGAATGGG GCATCCGCGT GGCCGACGAC AAGTGCACCC CGGTGGGCGC CAGCGTGGCC
CGTGGCGGCG CGACCAACTC GCCGGCCGCC GTCTACGCGC TCACCAAGTA CGTGGACTGG
ATGAAGAAGT ACGCGCCCAA GGAAGCCATG GGCATGACCT TCGGCGAGGC CGGCCCCGTG
CCCGCCCAGG GCCAGATCGC GCAGCAGATC TTCTGGTACA CCGCCTTCAC CGCCGACATG
ACCAAACCCG GCCTGCCCGT GGTGAATGCC GACGGCACGC CCAAGTGGCG CATGGCCCCC
GGCCCCAACG GCCCGTACTG GAAGCAGGGC ATGCAAAACG GCTACCAGGA CGTGGGCAGC
TGGACCTTCT TCAAGGACCA CAACCCCGAC CGTCTGGCCG CCGCGTGGCT CTACGCCCAG
TTCGTGACGG CCAAGAGCAC GTCGCTGAAG AAGACCGTCG TCGGCCTGAC GCCGATCCGC
GAGTCCGACA TCCGATCCAA GGCCATGACC GACATGGCGC CCAAGCTGGG CGGCCTGGTC
GAGTTCTACC GCAGCCCTGC GCGCGTGGCC TGGTCTCCCA CCGGCACCAA CGTGCCCGAC
TACCCCAAGC TGGCGCAGCT GTGGTGGAAG AACGTGGCCC AGGCCGTCAC GGGCGAGAAG
ACCCCGCAGG CCGCCATGGA CACACTGGCT GACGAGATGG ACCAGGTGAT GGCCCGCCTG
CAGCGCGCCG GCATGGAGCG CTGCGCGCCC AAGCTGAACG CCAAGGGTGA CCCGGCCAAG
TGGCTGAGCG ACCAGCACGC GCCATGGAAG AAGCTCGCCA ATGAGAAGCC CAAGGGCGAA
ACCATCAACT ACAACACCCT GCTGCAGGCC TGGAAAGACG GCAAGGTGCG TTGA
 
Protein sequence
MKMQFKAIAF AAAALALGQA AWAGEAEAKK WIDSEFQPST LSKDQQMAEM KWFIDAAKKL 
QAKGVKEIAV VSETITTHEY ESKTLAKAFS EITGIQVKHD LIQEGDVVEK LQTSMQSGKS
IYDGWISDSD LIGTHYRYGK ILNLSDYMAG PGKDYTNPGL DLQDFIGTKF TTAPDGKLYQ
LPDQQFANLY WFRADLFDRK DLKDKFKAKY GYDLGVPLNW SAYEDIAEFF TNDVKQIDGK
PIYGHMDYGK KDPSLGWRFT DAWLSMAGSA DIGTPNGLPI DEWGIRVADD KCTPVGASVA
RGGATNSPAA VYALTKYVDW MKKYAPKEAM GMTFGEAGPV PAQGQIAQQI FWYTAFTADM
TKPGLPVVNA DGTPKWRMAP GPNGPYWKQG MQNGYQDVGS WTFFKDHNPD RLAAAWLYAQ
FVTAKSTSLK KTVVGLTPIR ESDIRSKAMT DMAPKLGGLV EFYRSPARVA WSPTGTNVPD
YPKLAQLWWK NVAQAVTGEK TPQAAMDTLA DEMDQVMARL QRAGMERCAP KLNAKGDPAK
WLSDQHAPWK KLANEKPKGE TINYNTLLQA WKDGKVR