Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0381 |
Symbol | |
ID | 7385389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 392534 |
End bp | 394267 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643653695 |
Product | extracellular solute-binding protein |
Protein accession | YP_002551865 |
Protein GI | 222109601 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000205955 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATGC AGTTCAAGGC GATCGCGTTC GCCGCCGCGG CGCTGGCGCT GGGGCAGGCA GCCTGGGCCG GCGAGGCCGA GGCCAAGAAG TGGATCGACA GCGAGTTCCA GCCCTCCACG CTGAGCAAAG ACCAGCAGAT GGCCGAGATG AAGTGGTTCA TCGACGCGGC CAAGAAGCTG CAGGCCAAGG GCGTGAAGGA GATCGCGGTG GTCTCCGAGA CCATCACCAC GCACGAGTAC GAATCCAAGA CCCTGGCCAA GGCGTTCAGC GAGATCACGG GCATCCAGGT CAAGCACGAC CTGATCCAAG AGGGCGACGT GGTCGAGAAG CTGCAGACCT CCATGCAGTC GGGCAAGTCC ATCTATGACG GCTGGATCAG CGACTCCGAC CTCATCGGCA CCCACTACCG CTACGGCAAG ATCCTGAACC TGTCCGACTA CATGGCCGGC CCGGGCAAGG ACTACACCAA CCCCGGCCTG GATCTGCAGG ACTTCATCGG CACCAAGTTC ACCACCGCCC CGGACGGCAA GCTGTACCAG CTGCCCGACC AGCAGTTCGC CAACCTGTAC TGGTTCCGCG CCGACCTGTT CGACCGCAAA GACTTGAAGG ACAAGTTCAA GGCCAAGTAC GGCTACGACC TGGGCGTGCC GCTGAACTGG TCTGCCTATG AAGACATCGC CGAGTTCTTC ACCAATGACG TGAAGCAGAT CGACGGCAAG CCCATCTACG GCCACATGGA CTACGGCAAG AAGGACCCGT CGCTGGGCTG GCGCTTCACC GACGCCTGGC TGTCCATGGC CGGCAGCGCC GACATCGGCA CGCCCAACGG CCTGCCCATC GACGAATGGG GCATCCGCGT GGCCGACGAC AAGTGCACCC CGGTGGGCGC CAGCGTGGCC CGTGGCGGCG CGACCAACTC GCCGGCCGCC GTCTACGCGC TCACCAAGTA CGTGGACTGG ATGAAGAAGT ACGCGCCCAA GGAAGCCATG GGCATGACCT TCGGCGAGGC CGGCCCCGTG CCCGCCCAGG GCCAGATCGC GCAGCAGATC TTCTGGTACA CCGCCTTCAC CGCCGACATG ACCAAACCCG GCCTGCCCGT GGTGAATGCC GACGGCACGC CCAAGTGGCG CATGGCCCCC GGCCCCAACG GCCCGTACTG GAAGCAGGGC ATGCAAAACG GCTACCAGGA CGTGGGCAGC TGGACCTTCT TCAAGGACCA CAACCCCGAC CGTCTGGCCG CCGCGTGGCT CTACGCCCAG TTCGTGACGG CCAAGAGCAC GTCGCTGAAG AAGACCGTCG TCGGCCTGAC GCCGATCCGC GAGTCCGACA TCCGATCCAA GGCCATGACC GACATGGCGC CCAAGCTGGG CGGCCTGGTC GAGTTCTACC GCAGCCCTGC GCGCGTGGCC TGGTCTCCCA CCGGCACCAA CGTGCCCGAC TACCCCAAGC TGGCGCAGCT GTGGTGGAAG AACGTGGCCC AGGCCGTCAC GGGCGAGAAG ACCCCGCAGG CCGCCATGGA CACACTGGCT GACGAGATGG ACCAGGTGAT GGCCCGCCTG CAGCGCGCCG GCATGGAGCG CTGCGCGCCC AAGCTGAACG CCAAGGGTGA CCCGGCCAAG TGGCTGAGCG ACCAGCACGC GCCATGGAAG AAGCTCGCCA ATGAGAAGCC CAAGGGCGAA ACCATCAACT ACAACACCCT GCTGCAGGCC TGGAAAGACG GCAAGGTGCG TTGA
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Protein sequence | MKMQFKAIAF AAAALALGQA AWAGEAEAKK WIDSEFQPST LSKDQQMAEM KWFIDAAKKL QAKGVKEIAV VSETITTHEY ESKTLAKAFS EITGIQVKHD LIQEGDVVEK LQTSMQSGKS IYDGWISDSD LIGTHYRYGK ILNLSDYMAG PGKDYTNPGL DLQDFIGTKF TTAPDGKLYQ LPDQQFANLY WFRADLFDRK DLKDKFKAKY GYDLGVPLNW SAYEDIAEFF TNDVKQIDGK PIYGHMDYGK KDPSLGWRFT DAWLSMAGSA DIGTPNGLPI DEWGIRVADD KCTPVGASVA RGGATNSPAA VYALTKYVDW MKKYAPKEAM GMTFGEAGPV PAQGQIAQQI FWYTAFTADM TKPGLPVVNA DGTPKWRMAP GPNGPYWKQG MQNGYQDVGS WTFFKDHNPD RLAAAWLYAQ FVTAKSTSLK KTVVGLTPIR ESDIRSKAMT DMAPKLGGLV EFYRSPARVA WSPTGTNVPD YPKLAQLWWK NVAQAVTGEK TPQAAMDTLA DEMDQVMARL QRAGMERCAP KLNAKGDPAK WLSDQHAPWK KLANEKPKGE TINYNTLLQA WKDGKVR
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