| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0323 |
|---|
| Symbol | |
|---|
| ID | 7385331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 334242 |
|---|
| End bp | 334751 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643653637 |
|---|
| Product | putative outer membrane protein |
|---|
| Protein accession | YP_002551807 |
|---|
| Protein GI | 222109543 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3652] Predicted outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAGA TCTGCACCGC CAGGCTGGTG ACCGCAGCCT GCGGGCTGGT GCTCGCCGCA
GCGGCCCATG CCGACGCCAG CACGAAAGAC CGCGAATTCC TGACGCAGGC CGCTACCGGC
GGGCTCTACG AGGTCCAAGC CGGCAAGCTT GCACAGAACC GCGCTACGGC CAACGAAGTG
AAATCGTTTG GCGCCATGCT GGTGAAGGAC CACACCGCCG CCAACGATGA ACTCCGGGCC
TTGGCAGCGC GCAAGGGCGT CGCGCTGCCA ACCACCCTCC CTGGCGACAA GCAAAAGCAA
CTGGACCAGC TCGCCAAGGC CCAGAAATTC GACCAGGAAT TCCTCTCGCA GGTGGGCCTT
AACGACCACC GCCGCGATAT CGCGCTGTTC GAGGCGGCCG GCAAAGACGC AGACGATCCG
GAGATCCAGA CCTTCGCCCT CAAGGCGCTG CCGAAACTCA AGGCACACAA GGACCACGCC
GAAGACCTGG CGGTTTCCAT CAAGCGATGA
|
|---|
| Protein sequence | MPKICTARLV TAACGLVLAA AAHADASTKD REFLTQAATG GLYEVQAGKL AQNRATANEV
KSFGAMLVKD HTAANDELRA LAARKGVALP TTLPGDKQKQ LDQLAKAQKF DQEFLSQVGL
NDHRRDIALF EAAGKDADDP EIQTFALKAL PKLKAHKDHA EDLAVSIKR
|
|---|
| |