| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0317 |
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| Symbol | |
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| ID | 7383901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 326313 |
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| End bp | 329459 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643653630 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002551801 |
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| Protein GI | 222109537 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.173741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGT TCTTCATCGA GCGCCCCATC TTCGCGTGGG TGATCGCAAT TTTCATCATG
GTGATCGGCG CTGTCTCGAT CACCCAGCTG CCCGTGGCAC AGTACCCCAC CGTGGCTCCC
CCCACCATCC AGGTGACCGT GGCCTACCCC GGCGCAACGG CGCAGACACT GGAAGACAAC
GTGCTGTCCG TCATCGAGCG CGAGATGAAC GGCGCCACCG GCCTGGCCTA CATGGAGACC
ACCAGCCAGG CCAACGGCAC CGGCACCATC GTGCTGAGCT TCGAGCCCGG CACCAACGAC
GACCTGGCCC AGGTGGATGT GCAAAACCGC CTGTCGCGGG CCACGCCGCG CCTGCCGGCG
GCCGTCACCC AGCAAGGCGT GCGCGTCGAG AAATCGCGAT CCAACTTTCT GCTGTTTTCC
ATCCTCACGT CCGACAACCC GGACATAAAC ATCGACGCGC TCAACGACTA CGCTGCCCGC
AACGTGGTGC CCGAACTCCA GCGCCTGCCT GGCGTGGGCG GCGTGACGCA GTTCGGCTCC
GAGCGCGCCA TGCGCATCTG GATCGACCCG GCCAAGCTCA AGGGTTTCAA CCTGTCGCTG
GATCAGGTCA ATGCCTCCAT CCGCGCGCAA AACGTGCAGG TGTCCGCCGG CAACCTGGGC
GAGCTGCCCA GCCCAGCGGG CCAGACCATA TCGGCCACCA TTGTCGTGAA GGGCCAGCTG
TCCACACCCG AAGAGTTTGG CAACGTCATC CTGCGCGCCA ACACCGACGG CTCCACCGTG
CGCCTGAAAG ACGTGGCGCG CATCGAACTG GGCGCGCAGA CCTACAACTT CAGCGGCCGG
CTCAATGGCT CGCCTTCGGT GGGCATGGGC GTGCAGCTCA CCTCCAGCGC CAATGCGCTG
GCCACGGCCG ACGCCGTGAA GTCCAAGCTG GCCGAGCTGC AAAGGTACTT CCCGCAGGGC
GTGGCCTACA CCATCCCTTA CGACACCTCC ACCTTCATCT CGGTGTCCAT CGAAAAAGTG
GTCTATACCC TGCTTGAAGC GATCGGACTG GTGTTTCTGG TGATGTTCCT GTTCCTGCAG
AACTTCCGTT ACACCATCAT CCCCACCATC GTGGTGCCGG TGGCCTTGCT GGGCACCTTT
GGCGCACTGC TGGCCATGGG GTTCTCGATC AACGTGCTGA CCATGTTCGG CATGGTGCTG
GTGATCGGCA TCGTGGTGGA CGACGCCATC GTGGTCGTGG AAAACGTCGA GCGCATCATG
GCTGAAGAAG GCCTGCCACC GCTGCAAGCC ACGCGCAAGG CCATGGGCCA GATCTCCAGC
GCCGTGATCG GGATGACCGT GGTGCTGGTG TCCGTGTTCG TGCCGCTGGC CTTCTTTGCA
GGCTCGACGG GCAACATTTA CCGCCAGTTC GCGGTCACCA TGGCCACGTC CATCGCATTT
TCGGCCTTCC TGGCGTTGTC GCTCACCCCC GCGCTGTGCG CCACCCTGCT CAAGCCCGTG
ACCGAGGGAC ACCACGACAA AACAGGCTTC TTTGGCTGGT TCAACCGGTC CTTCAAGCAC
GCCACGCACA GCTACGAGTC CTTTCTGGCC AGGCTCGTGC GCCGCAGCGG CCGCATGATG
ATCATCTACG CCGTGCTGCT GGGCGCGGTG GCGGTGGTGT ACATGCGTCT GCCGACCTCG
TTCCTGCCCA ATGAAGACCA GGGCTTTCTG ATCTCCAACG TGCAACTGCC CCCTGGCGCC
TCGCAAGAGC GCACCCGTGC AGCATTGACC AAGGTGGAAG AGTTCATGCT CAAACAGCCT
GAAGTGCGCG ACATCGTCAC CGTTTCGGGC TTTTCGTTCT CGGGTCAGGG GCAAAACGCC
GGCCTGGCCT TCATCACCCT CAAGGACTGG AGCGAGCGCC CCGGTCCCGA CCAGACCGCG
CAGGCCGTGG CCGGTCGCGC CATGGGCGCG CTGGGCGGCT TTCGCGATGC GTTCATCTTC
ACGCTCAGCC CGCCACCCAT CCCCGAACTG GGCTCGGCGT CCGGCTTCAC CTTCCGCCTG
CAAGACCGCG GCAGCAAGGG TCACGATGCG CTACTGGCGG CACGCAATCA GCTGCTGGGC
ATGGCCTCGC AAAGCAAGGT GCTCGCCGCC GTGCGCCCCG ACGGCATGGA GGACGCGCCA
CAGATGCAGA TTGACATCGA CCGCGACAAG GCCAACGCCC TGGGCGTGTC CTACGACCGC
ATCGCCAGCG CGCTGGCGAC GGCGCTGGGC TCCACATACG TGAACGACTT CCCCAACCAG
GGCCGCCTGC AACGGGTAGT GGTGCAGGCC GACGGGTTTG CGCGCATGCA GCCCGAGTCG
GTGCTCGACA TCCCTATCCT CAACGACAAG GGCCAGGTGC TACCCCTGTC CACGTTTGCG
TCCACGCGCT GGATCACCGG CGCCATGCAG ACCGTGCGCT ACAACGGCTA TCCGTCGATG
AAGATCGCCG GTGACGCCGC CCCGGGCTAC AGCACGGGCG ACGCCATGGC AGAGATGGAG
CGCCTTGCCT CCCAGCTACC CGAAGGCTTT AGCTTTGAGT GGACCGGCCA GTCCCGCGAG
GAAAAACTTG CCGGCTCGCA AGCCCTCGTG CTGTATGCGT TCGCGCTGCT GGCGGTGTTT
TTGTGCCTGG CGGCGCTGTA CGAGAGCTGG TCCATTCCGT TCTCGGTGAT GCTGGTCGTA
CCGCTGGGCG TGCTGGGCGT GGTGCTGGGC GTGCTGCTGC GCGGCATGGC CAACGACGTG
TACTTCCAGA TCGGTCTGGT GACCATCATT GGTCTGTCGG CCAAGAACGC CATCCTGATC
GTCGAATTTG CCAAGGACCT GCAGGCCCAG GGCAAGAACA TCATCGAGGC CGCGCTGGAA
GCCGCCCACC TGCGCTTTCG CCCCATCGTC ATGACCTCGC TGGCGTTCAC GCTGGGCGTC
GTGCCGCTGT ATCTGGCCTC CGGCGCGAGC TCGGCCAGCC AGCGCGCCAT CGGCACCGGT
GTGGTCGGCG GGATGATCAC CGGCACGCTG CTGGCCGTGG TCTTCGTGCC CGTGTTCTTC
GTGGTGGTGC GCAGCTTCTT CAAGGGCAGC CGCCGCCAGC AGGAGCATGA CGCCCAGCAG
GCACTCCAAC ACCGCGGCGA GGCCTGA
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| Protein sequence | MAKFFIERPI FAWVIAIFIM VIGAVSITQL PVAQYPTVAP PTIQVTVAYP GATAQTLEDN
VLSVIEREMN GATGLAYMET TSQANGTGTI VLSFEPGTND DLAQVDVQNR LSRATPRLPA
AVTQQGVRVE KSRSNFLLFS ILTSDNPDIN IDALNDYAAR NVVPELQRLP GVGGVTQFGS
ERAMRIWIDP AKLKGFNLSL DQVNASIRAQ NVQVSAGNLG ELPSPAGQTI SATIVVKGQL
STPEEFGNVI LRANTDGSTV RLKDVARIEL GAQTYNFSGR LNGSPSVGMG VQLTSSANAL
ATADAVKSKL AELQRYFPQG VAYTIPYDTS TFISVSIEKV VYTLLEAIGL VFLVMFLFLQ
NFRYTIIPTI VVPVALLGTF GALLAMGFSI NVLTMFGMVL VIGIVVDDAI VVVENVERIM
AEEGLPPLQA TRKAMGQISS AVIGMTVVLV SVFVPLAFFA GSTGNIYRQF AVTMATSIAF
SAFLALSLTP ALCATLLKPV TEGHHDKTGF FGWFNRSFKH ATHSYESFLA RLVRRSGRMM
IIYAVLLGAV AVVYMRLPTS FLPNEDQGFL ISNVQLPPGA SQERTRAALT KVEEFMLKQP
EVRDIVTVSG FSFSGQGQNA GLAFITLKDW SERPGPDQTA QAVAGRAMGA LGGFRDAFIF
TLSPPPIPEL GSASGFTFRL QDRGSKGHDA LLAARNQLLG MASQSKVLAA VRPDGMEDAP
QMQIDIDRDK ANALGVSYDR IASALATALG STYVNDFPNQ GRLQRVVVQA DGFARMQPES
VLDIPILNDK GQVLPLSTFA STRWITGAMQ TVRYNGYPSM KIAGDAAPGY STGDAMAEME
RLASQLPEGF SFEWTGQSRE EKLAGSQALV LYAFALLAVF LCLAALYESW SIPFSVMLVV
PLGVLGVVLG VLLRGMANDV YFQIGLVTII GLSAKNAILI VEFAKDLQAQ GKNIIEAALE
AAHLRFRPIV MTSLAFTLGV VPLYLASGAS SASQRAIGTG VVGGMITGTL LAVVFVPVFF
VVVRSFFKGS RRQQEHDAQQ ALQHRGEA
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