| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0289 |
|---|
| Symbol | |
|---|
| ID | 7383873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 299916 |
|---|
| End bp | 301154 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643653602 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002551773 |
|---|
| Protein GI | 222109509 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGC TCACGCGGCG CACGGCCGTG GTCGTCTTCC TGGCCTTTGC GTTCACCTAC
TTCATCTCGG CGCTGTTGCG CGCGATCACC GCCACTCTGG CGCCCACACT GGAGGCCGAG
TTCCAGTTGC ACGCGCGCGA CCTGGGGCTG CTGGCGGGTG GCTACTTCCT GGGTTTCTCG
CTCACGCAAC TGCCGCTGGG CCGGTGGCTG GATCGTCACG GCCCGCGCGT GGTGCTGCTG
GGCTTTCTGG GCGTGGCGGT GGCGGGGTGC CTGGTGTTCT CCTGGGCCAC GGGCTTCTCG
GGGCTGCTTG CGGGGCGCAT GCTGTGCGGC GCGGGCGTCA GCGCCTGCCT GATGGCTCCG
CTCACGGGAT TCCGGCGCTG GCTGGAGCCT GGTGCGCAGC TGCGCGCCAA CTCCTGGATG
CTGATGACCG GTTCGCTGGG CATGGTGGCG TCCACTCTGC CGGTGCAGTG GCTGCTGCCA
CTGGCAGGGT GGCGCCCGTT GTTCTGGGGG CTGGCGGCGC TCATCGTGCT GGCCATGGCG
CTGCTGGCGC TGGGCGTGCC GCGCTGGCCG CAGGCGCCGG CAGAGTCGGG AGCAGGCGTA
GAAACGGGCT ATGCACAGGT GTGGCGCCAT CCGTACTTCC TGCGCACGGC GCCGCTGGGC
TTCTTCTGCT ATGGCGGCAT GGTCGCGGTG CAGACGCTGT GGGCCGCGCC CTGGATGCAG
CACGTGGCCG GCTATACGCC GTTGCAGGCC GCCACCGGGC TGTTCTGGAT CAATGTGAGC
ATGCTGATCA CCTTCTGGAC CTGGGGCATG GCCAGCCCGT GGTTGCTGCG CCGCGTGGGC
GGGGCCGACC CGGTAATGGC CGCGAGTTTG CCGCTGTCGC TGCTGGTGCT GGCGGGCATT
GTGTTGGCGG GCGGACGTGC GGGCGCCGCG GCCTGGGCGC TGTATTGCGT GTCATGCACC
AGCGTGGCTC TGTCGCAGCC CGCGGTGGCA TTGGCGTTCC CGCAGGCGCT GGCGGGGCGC
GCGCTGTCGG CGTACAACCT GGTGATCTTT GCGGGGGTGT TTGCCGTGCA ATGGGGTATT
GGCCTGGCGG TGGACGCGTT CGTGGCCGCC GGGCTGGACA TGGCGCGCGC CTACCGGGCC
GCCATGGCGC TGCACCTGGC CTGCACGGCG GGGGCCTATG CATGGTTCAT GGCGCGGCGC
GGGCACGGTG ATAATGCACT GCACTGCAGT ACCCCATGA
|
|---|
| Protein sequence | MSVLTRRTAV VVFLAFAFTY FISALLRAIT ATLAPTLEAE FQLHARDLGL LAGGYFLGFS
LTQLPLGRWL DRHGPRVVLL GFLGVAVAGC LVFSWATGFS GLLAGRMLCG AGVSACLMAP
LTGFRRWLEP GAQLRANSWM LMTGSLGMVA STLPVQWLLP LAGWRPLFWG LAALIVLAMA
LLALGVPRWP QAPAESGAGV ETGYAQVWRH PYFLRTAPLG FFCYGGMVAV QTLWAAPWMQ
HVAGYTPLQA ATGLFWINVS MLITFWTWGM ASPWLLRRVG GADPVMAASL PLSLLVLAGI
VLAGGRAGAA AWALYCVSCT SVALSQPAVA LAFPQALAGR ALSAYNLVIF AGVFAVQWGI
GLAVDAFVAA GLDMARAYRA AMALHLACTA GAYAWFMARR GHGDNALHCS TP
|
|---|
| |