Gene Dtpsy_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_0170 
Symbol 
ID7383434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp191082 
End bp191924 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content73% 
IMG OID643653484 
Product17 kDa surface antigen 
Protein accessionYP_002551655 
Protein GI222109391 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0398625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTCCA CCTCTGCTTC CCCTGCCGCG GCCCCGTCCG CGGCTTCGCT CAAATGGCTG 
TGGGCCGCCG TGGGCGTGCT GGGCGTGAGT GTGCTGGCCC TGGGCGGCAC GCTGCTGGCG
CAGAACTTGC GCGGCGGTCC GCCTGCTGGC GACTCCGCGG CCGGCGGACC GGCCGCCACG
CTGGCAGCCA CCGCGCCGCG CACGCCCGAG GCGGAAGTGT TGAATGAAAA AGCGCCTCCA
GCCCAGTCGC AGCAAGCGAT GGCAGCTCTC GATTCAGGAG CAAATCCCAC AGCCCGGCGC
GCAGCAGCGC CGCCTTCTCC ACAGGCGTAT CCACAGGACG ACCCACAGAC GTATGCACAG
GGCTATCCAC AGCCGGGGGC ATCGCCCTCG CCAGTGCCAA CCCAGCGCGG CGAACCGCTG
CAGCGGGCCG TGGCGCAGCG CAGTGCGGCG CCGGTGTGTG GCACCTGCGG GCGGGTGGAG
TCGGTGCGCG CTGTCGAGCA GGCCGCGCCG GCCACGGGCG TGGGCGCGGT GGCCGGCGGT
GTGCTGGGGG GCGTGCTGGG CAACCAGATC GGCAAGGGGT CGGGCCGCAC CGCGGCCACG
GTGCTGGGCG CCGTGGGCGG CGGCTACGTG GGCCACAAGG TGGAGCAGCG CGCCCGTACC
ACCACGGTCT ACCAGATGCG CGTGCGCATG GATGACGGTT CGGTGCGCAA CTTCACGCGC
GCCCAGCCGC TGGCCGAGGG CACGGCCGTA CGCGTGCAGG GCAAGAGCCT GCGCGTGGAC
CCGGGGGCCG ATGCCGACCG TGCGGGCGTG GAGCCGGTGC GCGTAGTGGA CCGGGGCTAT
TGA
 
Protein sequence
MHSTSASPAA APSAASLKWL WAAVGVLGVS VLALGGTLLA QNLRGGPPAG DSAAGGPAAT 
LAATAPRTPE AEVLNEKAPP AQSQQAMAAL DSGANPTARR AAAPPSPQAY PQDDPQTYAQ
GYPQPGASPS PVPTQRGEPL QRAVAQRSAA PVCGTCGRVE SVRAVEQAAP ATGVGAVAGG
VLGGVLGNQI GKGSGRTAAT VLGAVGGGYV GHKVEQRART TTVYQMRVRM DDGSVRNFTR
AQPLAEGTAV RVQGKSLRVD PGADADRAGV EPVRVVDRGY