Gene Dtpsy_0103 details

Gene Information

• Locus tag: Dtpsy_0103
• ID: 7384335
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 111704
• End bp: 113575
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643653419
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_002551590
• Protein GI: 222109326
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCCCCCG CGCATTTCGT CCTGCACGAC GTCTTTGGCT ACGAGCAGTT CCGTGGCCCG 
CAGCAGGCCA TCATCGACCA TGTGATCGCC GGCGGCGACG CGCTGGTGCT GATGCCCACG 
GGCGGCGGCA AGAGCCTGTG CTACCAGGTG CCGGCCATCG TGCGGCGCGA TGCGGGGCTG 
GGCGTGACGG TGGTGGTTTC GCCGCTGATC GCGCTGATGC ACGACCAGGT GGGCGCGCTG 
CACGAGGCGG GGGTGGAGGC GGCCTTCCTC AACTCCACGC TGGACTGGCA GCAGACGCAG 
GACGTGGAGA GGCGCCTGGC GCGCGGCGAG ATCACGCTGC TGTACGCCGC GCCCGAGCGC 
GTGACCACCG ACCGCTTTCT CACGCTGCTG GACGGTCTGC ATGCGCGCGG GCAGCTCGGG 
CTGTTCGCCA TCGACGAGGC GCACTGCGTG AGCCAGTGGG GCCACGACTT CCGCCCCGAA 
TACCGCCAGC TCGCGGTGCT GCACGAGCGC TATGCGGGCG TGCCGCGCAT TGCCCTCACG 
GCCACGGCGG ACGCGCTCAC GCGCGAGGAC ATCGTGCAGG GCCTGCGGCT GCAGCAGGCG 
CGGCAGTTCG TCAGCAGCTT CGACCGGCCC AACATCCGCT ACCGCATCGA GGAAAAGAAG 
GAGCCGCTCA CGCAGCTCAT GCGCTTCATC GACCGCGAGC ACCTGGGCGA GGCCGGCGTG 
GTCTATTGCC AGTCCCGCAA GCGCGTGGAG GAACTGGCCC AGGCGCTGTG CGATGCGGGC 
CTGACGGCGC TGCCCTACCA CGCGGGCCTG CCCGCCGAGG TGCGCCAGCA GAACCAGGAC 
CGCTTCCTGC GCGAGGACGG CATCGTGATG GTGGCCACCA TCGCCTTCGG CATGGGCATC 
GACAAGCCCG ACGTGCGCTT TGTGGCCCAT GTGGACATGC CCAAGAACAT TGAGGGCTAC 
TACCAGGAGA CGGGCCGCGC GGGCCGCGAC GGTCTGCCCG CCGACGCGTG GATGGCCTAC 
GGCCTGCAGG ACGTGGTGAA CCAGCGCCGC ATGATCGACG AGAGCCCCGC GGGCGAGGAG 
TTCAAGGCCG TGATGCGCGG CAAGCTCGAT GCGCTGCTGG CCCTGGCCGA GGCCACGGAC 
TGCCGGCGCG TGCGGCTGCT GGGCTACTTC GGCGAGGCGT CCGAACCCTG CGGCAATTGC 
GACAACTGCC TGAATCCGCC GGCCGTGTGG GACGGCACGG ATGCCGCGCG CAAGCTCCTG 
TCCACCATCT ATCGCGTGCA CGAGGCCAGC GGCCTGACCT TCGGCACGGG CCACATCATG 
GACATCCTGC GCGGCAAGGC CACGGACAAG GTCCAGCAGT TCGGCCATGA AAAACTCTCC 
ACCTTCGGCC TGGGCGCACA GTATTCCGAG GCGCAGCTGC GCGGCGTGCT GCGCCAGTTG 
CTGGCCGCCG GCGCCGTGGG GCTGCACAAG GTCACGACCG AGGGCGGCCA CAGCTTTGAC 
ACGCTGGCGC TGACCGAGGG ATCGCGCCCC GTGCTGCGCG GCGAGCAGAG CGTGCTGCTG 
CGCGAGGCCA CGGCCGCGGC CGGCCCCAAG AAGCCGCGCC GCGCCAGCGC CCCGCCGGTG 
GCAGCGGCCA ACCTGGGACA GGACGCCCAG GTGCGCTTCA TCAACCTCAA GGCCTGGCGC 
GCCGAGGTGG CGCGCGAGCA CAACCTGCCG GCCTACGTGA TCTTCCACGA CGCCACGCTG 
GCCGCTATTG CCGAGCGCAA CCCGGCCACG CTGGAGGATC TGCAGGGCAT CAGCGGCATG 
GGTGCGAAAA AGCTGGAGGC GTACGGCGCC GAAGTGCTGC GGGTGTGCGG CGCCGGGGCC 
GCGGCCGGCT GA 

 

Protein sequence

MSPAHFVLHD VFGYEQFRGP QQAIIDHVIA GGDALVLMPT GGGKSLCYQV PAIVRRDAGL 
GVTVVVSPLI ALMHDQVGAL HEAGVEAAFL NSTLDWQQTQ DVERRLARGE ITLLYAAPER 
VTTDRFLTLL DGLHARGQLG LFAIDEAHCV SQWGHDFRPE YRQLAVLHER YAGVPRIALT 
ATADALTRED IVQGLRLQQA RQFVSSFDRP NIRYRIEEKK EPLTQLMRFI DREHLGEAGV 
VYCQSRKRVE ELAQALCDAG LTALPYHAGL PAEVRQQNQD RFLREDGIVM VATIAFGMGI 
DKPDVRFVAH VDMPKNIEGY YQETGRAGRD GLPADAWMAY GLQDVVNQRR MIDESPAGEE 
FKAVMRGKLD ALLALAEATD CRRVRLLGYF GEASEPCGNC DNCLNPPAVW DGTDAARKLL 
STIYRVHEAS GLTFGTGHIM DILRGKATDK VQQFGHEKLS TFGLGAQYSE AQLRGVLRQL 
LAAGAVGLHK VTTEGGHSFD TLALTEGSRP VLRGEQSVLL REATAAAGPK KPRRASAPPV 
AAANLGQDAQ VRFINLKAWR AEVAREHNLP AYVIFHDATL AAIAERNPAT LEDLQGISGM 
GAKKLEAYGA EVLRVCGAGA AAG