| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0078 |
|---|
| Symbol | |
|---|
| ID | 7382769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 87722 |
|---|
| End bp | 88813 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643653395 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_002551566 |
|---|
| Protein GI | 222109302 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC GAGACGAACT CACGGCGATG GTGAACGAGC AGGCGGATCG GCAGTTCCGC
GAGCTCCTGA CGCCCGAAGC CATGGAGCAG ACCAGCACCG GCCAATGGCT GCCGGCTCTG
TGGCAGCAGA TGGAGGACGC CGGCTGGCCG TCGGCACTGG TCGCGGAAGC GCAGGGCGGT
GTCGGCCTGC CTTCGAGCGC CGCGTTCGAC GTCATCCGCC TGAGCGCGCA TTGGGGCGTT
CCGCTGCCGC TGGCCGAAAC CATGGCGGGT CGCGGACTCT GGACGGCGGT GGGGGGCGAT
CCGGACTTGG TGGCGGATCG TCCGGTGCTC CTGGGTGTAG GCGCGCAGGC GCGTGCGCCT
GCACTGCGGC TCGATGGTGA GTGCTCCCTG ACTGGCGAGA CAGGTTCCGT GAATTTCGGC
GAAGCGCCTG GCGCGCTGCT GCTGGTGCAG GCCCATATGC GCGACGATGC CCATGCGCTC
GTGCTGCTGG ACGTGCAGAA GCTCGCACCG CGTTCGGTGC GCACTCTGTC GTTCGAGGCA
CAGTGCGCAT TCAGCCTGGG CAGCGTTCCG GTCCCGACAG ACTATTGCCA GCCATGGGAC
GTGCGCGATC CGCGCGCGCT TCAGGCCGTG GGTGCCGTGC TGCGATCGGT GCAGATGGTG
GGCGCAATGC AGCGCTGCCT GGCGCTGGGG CTGCAATATT CGCAGGAGCG GGTGCAGTTC
GGCCGGCCGA TCTCGCGCTT CACGCCTGTG CAGGACATGT TGGTGGAAGC CGCAGCGGAA
GTCTCCGCCG CCGTCAATGC CGCCAGCCTG GCGGTGGACC ATTGGCAGCC GGCGCCGACG
CCCGACGGCG TGTTCGCTGC CGCCGTGGCC AAGTCCCGCT GCGGCGAGGC TGCCGGAAAG
GTGGCCGCAT TTATCCACCA GGTGCACGGC GCCATGGGGT TCACGCAGGA GCATGTGCTG
CACCAGTTCA CACGCCGCCT CTGGGCCTGG CGCGACGAAT TCGGCACGGA GGCGTACTGG
AACCACCAGA TCGGCACGCG CGTCTGCGCA GCCGACGGGC ACAGCCTGTG GCCCCTACTC
ACGGCCCTTT GA
|
|---|
| Protein sequence | MSERDELTAM VNEQADRQFR ELLTPEAMEQ TSTGQWLPAL WQQMEDAGWP SALVAEAQGG
VGLPSSAAFD VIRLSAHWGV PLPLAETMAG RGLWTAVGGD PDLVADRPVL LGVGAQARAP
ALRLDGECSL TGETGSVNFG EAPGALLLVQ AHMRDDAHAL VLLDVQKLAP RSVRTLSFEA
QCAFSLGSVP VPTDYCQPWD VRDPRALQAV GAVLRSVQMV GAMQRCLALG LQYSQERVQF
GRPISRFTPV QDMLVEAAAE VSAAVNAASL AVDHWQPAPT PDGVFAAAVA KSRCGEAAGK
VAAFIHQVHG AMGFTQEHVL HQFTRRLWAW RDEFGTEAYW NHQIGTRVCA ADGHSLWPLL
TAL
|
|---|
| |