| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0071 |
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| Symbol | |
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| ID | 7382762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 80000 |
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| End bp | 81010 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643653389 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_002551560 |
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| Protein GI | 222109296 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAACC TGTTGGACCA TCTCTGCGAG ACCGTCACCC GCGCACGCAC CGTCGAAGAG
CTCACCCGGC CGCTGCTGGA GCTGCTGGAA GACATCACCG GGTTCGAATC CACCTACCTC
ACGGTGGTGG ACCTGGAGCG GGGTGTGCAA CGTGTGCTGT ACGCGCGCAA CACGCGCCAG
ATGCAGATCC CCGAGGGACT GAGCGTGCCC TGGCACGACA CGTTGTGCAA ACGCGCGCTG
GACGAGGGGC GACCCTTCAC CGCCGACGTG GGGCAATGCT GGGGCGATTC GCAGGCCGCC
GCCGCGCTGG GCATCCAGAC CTACGCCAGC ACACCGGTGC GCATGGCCGA CGGCCAGCTC
TACGGCACGC TTTGCGCCGC CAGCGACGAG CGCCAGGAGC TCACTTCCCA GGCGCGCAAC
GCGCTGACGC TGTTCGCGCG GCTCATTGGC CAGCAGGTCG AGCGCGAGGA GCTGCTGCAG
CAATTGCTGC AGGCCAATGC CCGGCTGGCG GCCTATGCGG CGACCGATGC CCTTACCGGC
CTACCCAACC GCCGCTCGCT GCGCGAAATG CTGCACCAGC AACTGGCGCA AGGCGCGCGC
CAGGGCACGG CGGTGCTGAT CGCCTTCATG GACCTGGACG GTTTCAAGGC GATCAACGAC
ACCTATGGCC ACGAGGTGGG CGACCTCTTC CTGGCCGACA TGGCCGATCG GCTGCGCGGC
GCGGCGCGCG CGCAGGACTT CGTCGCACGC TACGGGGGCG ATGAGTTCGT GGCCGTAGGC
CCCGGCCCCG CGCCCGGCCC GGCGCTGGAG GCGGCCCGCC AGGGGTTCGG CCAGCGCCTG
GCACAGGCCA CGCGCGGGCG CTTTGGCGGG GCGGGCGCCC CCATCGACTA CGCCGGCGCC
AGCGTGGGTG TGATCGCCGT GCTCCCCAAC GGCATGACGG CCGACGAGGC GCTGCGCGAG
GCCGACCGCG CCATGTACGC CGCCAAGAAG GCGCGCCGCG CCGTGCGCTG A
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| Protein sequence | MDNLLDHLCE TVTRARTVEE LTRPLLELLE DITGFESTYL TVVDLERGVQ RVLYARNTRQ
MQIPEGLSVP WHDTLCKRAL DEGRPFTADV GQCWGDSQAA AALGIQTYAS TPVRMADGQL
YGTLCAASDE RQELTSQARN ALTLFARLIG QQVEREELLQ QLLQANARLA AYAATDALTG
LPNRRSLREM LHQQLAQGAR QGTAVLIAFM DLDGFKAIND TYGHEVGDLF LADMADRLRG
AARAQDFVAR YGGDEFVAVG PGPAPGPALE AARQGFGQRL AQATRGRFGG AGAPIDYAGA
SVGVIAVLPN GMTADEALRE ADRAMYAAKK ARRAVR
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