| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0012 |
|---|
| Symbol | |
|---|
| ID | 7382703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 10940 |
|---|
| End bp | 12358 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643653330 |
|---|
| Product | homoserine dehydrogenase |
|---|
| Protein accession | YP_002551501 |
|---|
| Protein GI | 222109237 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.728091 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGTAG AACCCCAGTT CAGCCCCTCG CCCGAGGTGC ACGCCAGTGC GCGCCGCGCC
CCGGCCCCGC CCCCTGCCCT GCGCGTGGGC ATGATCGGCA CCGGCACCGT GGGCAGCGGC
GTGTGGCGGG TGCTGCGGCG CAACCGGGAC CTCATCAACG CACGCGCCGG GCGCGCCATC
GAGATCGTCG CGGTCGCCGC GCGCAACACC GCGCGCGCCG CTACGGCGCT GGACGGCGCG
CCCGGCGTGC GCCTGCTGAC CGACCCGCTG CAACTGGCCG CCGACCCCGG CGTGGACGTG
GTGCTGGAGC TGGCCGGCGG CACCGGCGCC GCACGCGACT GGGTGCAGGC CGCGCTGGCG
CATGGCAAGC ATGTGGTGAC CGCCAACAAG GCCCTGCTGG CCACGCACGG CGAGGCGCTG
GCGCAGACTG CCGCGCGCCA TGGCCGGGTG CTGGCCTACG AAGCGGCCGT GGCCGGCAGC
GTACCCGTGA TCAAGGCGCT GCGCGAAGGG CTGGCGGCCA ACCGCATCAC CGCGCTGGCA
GGCGTGCTCA ACGGCACCAG CAACTACATC CTCACGCGCA TGCAGGCGGC GGGCCTCGGC
TTTGCCGCCG CGCTCACCGA AGCCCAGGCA CTGGGCTATG CCGAGGCCGA TCCGGCCTTC
GACGTGGACG GCACCGACGC CGCGCACAAG CTGGCGCTGC TGGCCGCCAA CGCGTTCGGC
ATGCCGGTGC GGCTGGACGC CGTGCACGTC GAGGGCATCC GCGACCTGCA GCGGGGCGAC
GTGGCCGCCG CCGCGCATCT GGGCTACGCC GTCAAGCTGC TGGCCGTGGC CGAGCAGCAG
GAGTGCGAGG GCCGCATGGC CATCCAGCTG CGCGTGCACC CGGCCCTGGT GCCCGCGCGG
CACCCGCTGG CGCTGCTGGA CGGCGCGACC AACGGGCTGC TGGTGCGCGG CGACGCAGCC
GGCAGCGCCT TTTTCAGCGG CGCGGGCGCC GGCGGCGAGC CCACGGCGAG CGCCGTGCTG
GCGGACCTGA TCGACCTGGC GCGCCTGCCG GCTGTTTCTT CCCCGACGCC CACGGGCCCT
GGCGTGCCCA CACTGGGCAC CCACCGCCGC GCGGGCGACG ACCCCGCCGT ACTGCCGATG
GCCCCAGTGA AGACGCCGCA CCTGCTGCGC CTGCTGCCCG GTGCGGCCCT GTGCGAAACG
GCAGTGCTAC GGGCGCTGGC GCGCGAGGGC GTCAGGGTGC GGCGCCGCAC GTGGGCGGCA
CCCGTCACAC CGGGCGGAGC GCCCGAGTTA CTGCTGCTCA CCGCGCCGAC GCCCGATGCG
CTGGCCGCAG AGGCCACGGC GCATTTGCAG GCGTACACGG GTGCGCAGGT GCGGCGGCTG
CGCGTGGAGC TGTGCAGCGC CCTCACGGAT GAACAATAA
|
|---|
| Protein sequence | MFVEPQFSPS PEVHASARRA PAPPPALRVG MIGTGTVGSG VWRVLRRNRD LINARAGRAI
EIVAVAARNT ARAATALDGA PGVRLLTDPL QLAADPGVDV VLELAGGTGA ARDWVQAALA
HGKHVVTANK ALLATHGEAL AQTAARHGRV LAYEAAVAGS VPVIKALREG LAANRITALA
GVLNGTSNYI LTRMQAAGLG FAAALTEAQA LGYAEADPAF DVDGTDAAHK LALLAANAFG
MPVRLDAVHV EGIRDLQRGD VAAAAHLGYA VKLLAVAEQQ ECEGRMAIQL RVHPALVPAR
HPLALLDGAT NGLLVRGDAA GSAFFSGAGA GGEPTASAVL ADLIDLARLP AVSSPTPTGP
GVPTLGTHRR AGDDPAVLPM APVKTPHLLR LLPGAALCET AVLRALAREG VRVRRRTWAA
PVTPGGAPEL LLLTAPTPDA LAAEATAHLQ AYTGAQVRRL RVELCSALTD EQ
|
|---|
| |