Gene Avi_9643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9643 
Symbol 
ID7381860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011991 
Strand
Start bp108053 
End bp115738 
Gene Length7686 bp 
Protein Length2561 aa 
Translation table11 
GC content52% 
IMG OID643653303 
Productpeptide synthetase 
Protein accessionYP_002551474 
Protein GI222109209 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1020] Non-ribosomal peptide synthetase modules and related proteins 
TIGRFAM ID[TIGR01733] amino acid adenylation domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTAACA TTGAAGAGCT TCTCCCGCTA TCACCTTTGC AGAAGGGCCT TCTCTTCCAC 
TCACTTTATG ATGAGAGTGG TGTTGACGTC TATCACATCC AATTTACGAT CGAGCTGCGT
GGCAAATGTG TGCCCGAGAA GCTGCGGAAA TGCGCTGACT TGCTTCTGCA TCGTTATCCG
AACATCCGTG CTGGGTTCGA ATATGAGGAT TTGGACGATC CGCTGCAAGT CGTTCTAGAT
ACCGTCGATC TTCCCTGGCA CACGGTCGAT ATCTCTGACC ACGAGGAGCG AGAAAAGGAA
GGGATATTAG ATAAGATTTC CGCCTTTGAC CGGACAACAA GATTCAGAGC CGACAGGCCA
CCATTGCTTC GCTTTACCTT CGTCAAACTG GATTCAGACA GAGCTTATCT TTTTTTTACG
CACCATCATC TCATACTCGA CGGATGGTCG TTGCCTGTAT TTCTTCGTGA GCTGTTTGAG
CTTTATGACT GTAATGGGGA AGTCGAAGCG CTACCGTCCG CTGCCTCTTA TCGAGACTAT
CTCGACTGGA TGACCTCCGC AGATGGCGAA AGTTCTCGCG AGGCATGGAC GCAATATCTA
CTCGATTACG ATTATCAGCG GAACGCGTTG CACGGCAATG TATACGACGC CCACCAGCCT
CAGACGGTAC TACGAACAAT CAGTAGCTCG CTTACCCAGC AAGTTCTTAC GCTATCGCGA
ACAGTTGGTG TCACGGACAG CACTATTATG CAGGCGGCTT GGGGAATTTT TCTCAGCCTG
ATCGAGGCTC GAAGTGATGT TGTTTTCGGA GTGGTTGTAT CAGGTCGCCA TCCAGAAGTT
CCTGACGTTG AGAGGATCGT GGGCTTGTTG GCAAACACGA TACCTCTTCG CTTCAGGGTG
GACGGCAGTG AGAAGGTTAA GGCGTTACTC TGCAGGGTGC AATCCGAGCA AGCTGGCTTG
ATCCAGTTTC ACTCGACAAG CCTCGGGGAT ATTCAAAGAT GGATCGGAAC CACGAATCTT
CTGGAAAGCG TTGTGGTTTA TCAAAACTAT CCCCTAGGAG GAGAAAGTGT GTGGAGAGGA
GAATCGTTCT CAGCTGAGTT TGTTGACTGC TCAGGGGGAC AATCGCACTA TCCGCTTCAT
CTTTCGATTT TCCCGGGTAG ATCAACAGAG ATCAGGCTTA GTTACCAACC ACATTTGTTT
GACCGCGACA CCGTAGAAGC GTTTGCCGAT CGGTTTATCC GCCTTCTGGA GGCTATTGTC
TCCGATCCCG AACAACGCCT AGACGAAATC GATCTGTTAG ACCCCGACGA ACGTCACAAG
GTTCTTGTAG AATGGAATGA CACGCGACGG CCGATTTCCC GGGAGTTGTT ACCTGAACTC
TTCCAAGCCC AGGCTGCCCG CACACCTGAT GCTATCGCCC TTGAATGTGA AGGCGAGCAA
ATTTCGTACG CCGAACTTGA GGCCCGCGCC AACCGGATGG CCCGGTATTT AATTGAGCTG
GGCGTGGGAC CTGAGACGAT TGTCGCACTG GCGCTTCCAC GGTCAATCGA CATGGTTGTG
TCTTTGCTGG CGGTTCTCAA GTCAGGTGGG GCTTATCTGC CTCTCGACCC GCAATATCCG
ACCGAAAGAT TAGCGTTCAT GGTGGCTGAC GCGCAGCCCG CCACGGTAAT CGCGGTGGCA
TCGACGGCAG AAAAGCTGCC TGAGGATGCT CCTCTCCTAC TTCTAGATGA CGCTGGAGTC
CTCGAACGGA TCTCCGCATT TTCCGATTCC GCGGTCATCG AGACAGAACG GCACGCGCCG
CTCGACCCAC TACATCCCGC CTATGTCATC TATACATCCG GATCAACCGG AAAACCCAAA
GGCGTGGTTG TGAATCATTC GGGGTTCACA AATTTCCTTG CCGCGATGAC TGAAATCTTC
GATCCATTCG CGCAAACACC GTTTTATGCG ACCACGTCAA TCGCTTTTGA TATCGCCGGT
ATGGAACTCT TTCTGCCGCT TGCCACCGGA GGCCGGCTGA ATCTCTCAGC CCAGTCCGCC
GCGTTGCAAG CCCAGGAGAC GGTTCGTGCA TTAACAAATG CTCCATCTGG CTTGTTCCAG
GCAACACCGT CTGCTTACAG GAATCTCGCC GAAGTTCATT CGGCGGGGAA TGTAGCGGCT
TTGTGCGGGG GTGAACAGCT TACGAGCGAC CTAGCACAAC AAATTCTTAG CACGTACGGA
AGTCTTCATA ATCTCTACGG GCCGACCGAA ACGACAATAT GGTCTCTTTG CGCAGCTATC
AGCGATGTGG AATCCGAGGG TTCGGTTCCG ATTGGGCGCC CGATTTCGAA TACATTTGTT
TATGTCCTCA ATGATACTTT GCAACTGGTT CCGCCTGGGG TTGTCGGGGA GCTTTACATA
GCGGGAGCAG GCCTGGCGCG AGGTTATCTG CGTCGGCCCG GCCTGACTGC CGAACGGTTT
GTAGCTGATC CCTTTGGTGA GGCTGGCACG CGCATGTATC GGACTGGAGA CCTCGTCAAA
TGGCGTAGCG ACGGTATTCT GGACTATTTA GGGCGGGCCG ACGAGCAGGT TAAGATCCGT
GGTTTCCGTA TTGAGCCCGG GGAGATCGAG GCCGCTCTGC TCTCTCATCC TAGCGTTTCA
CAAGCCGTCG TCATCGCGCG CGAGGATAGC TCCGGTGACA AAAAGCTTCT GGGATATGTG
GTCAGTCAGT CGGGCTCTCT CATAGACGCA CAAGCATTGC GGCAATTTCT CCGCGATCGT
CTTCCTGATT ATATGGTTCC AGCGGCGATC ATAGCGCTCG ATCGTCTTCC CCTGTCTCCA
AATGGCAAAC TTGATCGCAA GGCTCTGCCG TCGCCTACTT ACGAGGTTTC AGTCGGCCGG
GAACCTTCGA CCCCACAGGA GGAGCTTCTT TGTGGCCTTT TCGCTGAAGT CCTGGGGTTA
AATCAGGTAG GTATCGACGA TAACTTCTTC GACCTGGGGG GACATTCACT ACTTGCTACT
CGCCTAATAT CTCGAATCCG CTCCACCTTC AGCCGTGAGG TTGCTATCCG AACGCTTTTC
GAGGCCCCGA CCGTTGCTCA ATTAGATCGA TACCTCAATA AGTCGGATAC CGCGCGGACG
GCATTGCAAA AACAGATGCG ACCGCCGCGT CTTCCTCTGT CTCCGGCGCA GCGTCGCCTT
TGGCTTCTAG ACCGGATTGA TGGTCATAGC TCGACATATA ATATTCCGAT CGCCCTGCAC
CTGAACGGCG ATATAGAGAT ATCTGTCCTA AAGTCATGCT TGAAAGACAT CCTACTAAGG
CACGAAAGCC TAGCGACTAC TTTCGTAGAG GTTGAAGGAA TTCCCCACCA AGAGGTGGTA
TCCGCTGACA ATTTAAATAT TGATATTATC ACAAAGAAGA TTGCCCATGA GAATCTCAGT
ACTGCACTTG TAGCTGCCGC AAACTATAAC TTCGATCTCT CGATAGATGT CCCAATACGA
CCTTATCTAT TCCAACTCGG CCAAAATGAA TATGTGCTCC TGATCCTCCT GCACCATATC
GCCGCCGATG GATGGTCGAT GTTTCCGCTG TTGAGAGATC TTTCTGCTTC CTACAATGCT
CGGAGCAAAG GAAAAGAGCC TGAATGGACC CCTTTGTCGG TTCAGTATGC CGACTATACA
CTGTGGCATC AAGACGTCTT AGGCAGCGAA AGCGACCAGG ATAGTCTCAT TTCAAAGCAA
ATTGAGTATT GGCGAGAAGC GCTTAAGGGC CTTCCGGACG AGATCAATCT ACCAGTCGAT
CGAACCAGGC CCGCAATAGA AAGCCATCGC GGGGCGGAGG TGGAATTTGC TCTTTCTGGG
GAGCTTCATG CCGGCTTGAA AGCCTTGGCA AGGAACGAGC GTGTAACATT ATTTATGCTC
TTCCATAGCA CCCTCGCAGC GCTCCTTTAT CGGTTAGGCG CGGGGACAGA CATTGCGATT
GGGAGCCCGG TAGCGGGACG CATGGATGCT GCTCTTGAGG ACCTCGTCGG ATTTTTCGTC
AACACCCTCG TATTCCGTAT AGACACTGCC GATAATCCCA CGTTCCGCGA GCTATGTGGC
CGGGTTAGGG ATATTACACT TGATGCTTAT GCACACCAAG ATCTACCCTT CGAGCGGCTG
GTCGAGCTTT TGAACCCAAG CCGTTCTTTA GCAAAGCATC CCCTCTTTCA AGTCCTTCTA
GTGCTTCACA ACAACCTTGA GGCCAATCTC GCATTTGATG GCGTCGACGC CTCAATTGAA
AAGGTAAACG TAACCTCCGC CAAATTCGAC CTCTCTTTTG CCCTCCGAGA ACAGTTCGAC
GCGGATAAGG CACCTGCCGG CATCTTCGGC GCAATCGAAT ATGCAACAGA CCTTTTTGAT
CGCGACACCG TAGAAGCGTT TGCCGATCGG TTTATCCGCC TTCTGGAGGC TATTGTCTCC
GATCCCGAAC AACGCCTAGA CGAAATCGAT CTGTTAGACC CCGACGAACG TCACAAGGTT
CTTGTAGAAT GGAATGACAC GCGGCGGCCG ATTTCCGAAG CGCTGCTGCC GGAACTCTTT
CAGGCTCAGG TCGCCCGTAC ACCTGATGCC ATTGCCGTCG TTGATCGCGA CCACGTTCTT
ACTTATAGGG ATCTTGAGAC CCAAGCAAAT CGTTTGGCCC ACTACCTCGT AAATTTAGGT
GTGGGTCCAG ATCGTCCTGT AGTCATATGC ATCGAACGTT GTATCGACGT CGCGGTTGGC
CTCTTAGCAA TTCTGAAAGC GGGCGGCGCA TACGTAGCTG TAGATCCCGT CTACCCGAAA
GACCGCATCG ATTTTGTCGC ACGGGATGCC CGACCAGCGG TGGTCATTAC GATGTCCCGG
CACGCTGAGT TATTTGTAGG ACTGCATCCT TCCGTCCCAG TGATCTCGAT CGATGCCGAT
CACAATGAGT GGAGTACGAT GTCAGGCGCG CCCCCTGAGA TGGGAGGGAA TGACTCTCGT
CTCGCTTATA TCTGCTACAC CTCCGGCTCA ACCGGCACTC CGAAAGGAGT TATGATAGAC
CATGCCGCAG TCGTCCGAAC CGTGATGGCG ACCGACTATG CGAATTTTGG CGTTCGCGAA
ACGTTTCTTC AATTCGCCCC ACTAGCCTTT GACGCTTCAA CTTTCGAGAT CTGGGGTGCT
CTCCTCAATG GTGGCCGCTT GGTATTCGCT CCGCCCGGAA AGGTTGGCCT TGATGAGGTT
TGTGATCTTG TGCAGAAATT TAACGTGACG ACTTTGTGGC TTACGGCCGG CATCTTTCAA
CTCCTTTCCG AAGAGCATCT GCAGTGCCTG TTCTCCCTCC GGCAACTGCT GGCGGGAGGG
GACGTATTGT CCCTCGATAC GATAAACCGG GTTAACAAAG CTCTTCCCAA TTGCCAGGTA
ATCAATGGCT ACGGCCCAAC GGAGGCGACA ACATTTTCAG TGTGCCACGC CTTTCCGAAA
GGGATCGCGA CTGAAATACC GATTGGGAAA CCAATTGCGA ATACAAAGGT CTATGTCCTC
GACAAATGTC TTGCCCCGGT TCCAATTGGA GTGGTTGGCG AACTTTATAT TGCAGGAAGA
GGCGTAGGGC GTGGCTACCT AAACCACCCC TCGCTTACAT GTGAAAAGTT CATTAGTAGT
CCGTTTGGAG ATTCGGGAGA CCGTCTTTAC CGAACCGGAG ATTTAGTCCG ATGGGGCCGA
GACGGCCTAC TGAGGTTTCT CGGGCGGGCC GACGAGCAGG TTAAGATCCG TGGTTTCCGT
ATTGAGCCCG GGGAGATCGA GGCCACTCTG CTCTCTCATC CTAGCGTTTC ACAAGCCGTC
GTCATCGCGC GCGAGGATAG CTCCGGTGAC AAAAAGCTTC TGGGATATGT GGTCAGTCAG
TCGGGCTCTC TCATAGACGC ACAAGCATTG CGGCAATTTC TCCGCGATCG TCTTCCTGAT
TATATGGTTC CAGCGGCGAT CATAGCGCTC GATCGTCTTC CCCTGTCTCC AAATGGCAAA
CTTGATCGCA AGGCTCTGCC GTCGCCTACT TACGAGGTTT CAGTCGGCCG GGAACCTTCG
ACCCCACAGG AGGAGCTTCT TTGTGGCCTT TTCGCTGAAG TCCTGGGGTT AAATCAGGTA
GGTATCGACG ATAACTTCTT CGACCTGGGG GGACATTCTG TCCTTGCTAT GAGGCTCATG
GCACGTATTC GCCAAACTTT CGGAACCACT GTAGCCTTAC GCACGATATT TGAAGCATCA
ACCGTTTCTG CCTTATCACT TTATCTTGAG ACTAAGAATA TAGCTAGTAA TGAACTTCCG
CCGATTTCCG TGCATTCTGA ACGCAAAGCG CCGGTGACTC CCAGCCAGCA TCGACTTTGG
GATAAAGCAA AAAAAGCTAC GAGCGATTCT GCAGCACGTA TTGATCACAG CTCTGAAAAC
CTCGTCCAAA CCCTCGAAAT TGTCGGAAAT CTTGATGTCG GAGCATTCTT GAAAGCCAGC
GACGCCTTGG TAAAGAAGCA CGAAGCACTT CGGACGGTAT TCAGCGACAG TAATAATATG
GCTTATCAGG AAGCGCATGC GAACGAGATC TGCGTAGCAA GTTACTTTGA CCTAGTTGGA
TATACCATTG AGGAGATAGA GGAAAAAAAG AAGGATTTTG GAGTCAAGCC ATTCGACCTC
TCAACTAGTC TTCCTCTTCG AGTCGGAATC TTCAAGCTTC AAGACAAAAA ATTTCATGTC
ATTTTTGTGG TTCACCACAT CGTAGCTGAC GGGTGGTCAA TAGGAATAAT GAATGCTGAT
TTCGAGGCCC TGTATAACCA CGTTGCTGCA GGTAGGGCTT TGTCTCAGAG CAATAATGGG
AGGCACGCTT ATCAATACAT CGACTATGCG CACTGGCTCC AACAACGGCT TGATCAGGGC
GATTTCGAGG ATCAGTTTCT ATATTGGAAG AAAAAGCTAC AGGACCTTCC CAGCTTGGCC
GTCTGCGTGA CGAAAGAACC TCACGATGGT CGCGACACGG TTGAAGCGAA CAAGTTGATG
TTCGCGATCG AGCCTTCGAC CCGTGGAGAC GTAATTGGCC TCGCGAAAGA AGCTAGAACG
ACCCCCTTTG GTGTATTCAT GACAGCGCTC CGGATTCTTG TTTGGATCGA AACTGGTGCC
AAAGACATCG CAGTTCAGGC TCCGGTCGCA AACCGCAGAG ATCCAGATAC CCATCTGATA
TTAGGTAGGT TCTTTAACTA CATTGCAGTT CGTTCGGAGC TCGCTGAAAA TGAGACAGCG
ATCTCAACAA TTCGGAACAA CCATTCGTCT TTTGTTGAGG CGCAAGAAAA TCAAGAGGTG
CCTTTTGAGT TGATATACGA AGCAATCACT GGCGGCAAAG AGCTTTTTAA ACGTCCGCTG
GCGGAATATG CGATTACTAT GGAACCTGCT GGGAAGCCGC TGACTTTGGA CGGCGTAAAT
GTGGAATCAA TTCCCAGCGT CGGGGTTGAG AACCTGAAAC GAACACTGAA TTTGACTCTC
GTTGAGAGCG GTACATCGCT TCTTTGTCAG ATGAGGTTTG ATGCGAAGCG TTTCGACAAA
GTGCACAGCG CTATGTTCCG TGACGATTGG CTGCATATTT TAAAGTTGGT CACAACTGAC
CCCGGAATTT CTTTGTTAAC TATTAGAGAG AAGCTAGTCA CGTCTAGACG TGATTCTCAT
GACTAG
 
Protein sequence
MPNIEELLPL SPLQKGLLFH SLYDESGVDV YHIQFTIELR GKCVPEKLRK CADLLLHRYP 
NIRAGFEYED LDDPLQVVLD TVDLPWHTVD ISDHEEREKE GILDKISAFD RTTRFRADRP
PLLRFTFVKL DSDRAYLFFT HHHLILDGWS LPVFLRELFE LYDCNGEVEA LPSAASYRDY
LDWMTSADGE SSREAWTQYL LDYDYQRNAL HGNVYDAHQP QTVLRTISSS LTQQVLTLSR
TVGVTDSTIM QAAWGIFLSL IEARSDVVFG VVVSGRHPEV PDVERIVGLL ANTIPLRFRV
DGSEKVKALL CRVQSEQAGL IQFHSTSLGD IQRWIGTTNL LESVVVYQNY PLGGESVWRG
ESFSAEFVDC SGGQSHYPLH LSIFPGRSTE IRLSYQPHLF DRDTVEAFAD RFIRLLEAIV
SDPEQRLDEI DLLDPDERHK VLVEWNDTRR PISRELLPEL FQAQAARTPD AIALECEGEQ
ISYAELEARA NRMARYLIEL GVGPETIVAL ALPRSIDMVV SLLAVLKSGG AYLPLDPQYP
TERLAFMVAD AQPATVIAVA STAEKLPEDA PLLLLDDAGV LERISAFSDS AVIETERHAP
LDPLHPAYVI YTSGSTGKPK GVVVNHSGFT NFLAAMTEIF DPFAQTPFYA TTSIAFDIAG
MELFLPLATG GRLNLSAQSA ALQAQETVRA LTNAPSGLFQ ATPSAYRNLA EVHSAGNVAA
LCGGEQLTSD LAQQILSTYG SLHNLYGPTE TTIWSLCAAI SDVESEGSVP IGRPISNTFV
YVLNDTLQLV PPGVVGELYI AGAGLARGYL RRPGLTAERF VADPFGEAGT RMYRTGDLVK
WRSDGILDYL GRADEQVKIR GFRIEPGEIE AALLSHPSVS QAVVIAREDS SGDKKLLGYV
VSQSGSLIDA QALRQFLRDR LPDYMVPAAI IALDRLPLSP NGKLDRKALP SPTYEVSVGR
EPSTPQEELL CGLFAEVLGL NQVGIDDNFF DLGGHSLLAT RLISRIRSTF SREVAIRTLF
EAPTVAQLDR YLNKSDTART ALQKQMRPPR LPLSPAQRRL WLLDRIDGHS STYNIPIALH
LNGDIEISVL KSCLKDILLR HESLATTFVE VEGIPHQEVV SADNLNIDII TKKIAHENLS
TALVAAANYN FDLSIDVPIR PYLFQLGQNE YVLLILLHHI AADGWSMFPL LRDLSASYNA
RSKGKEPEWT PLSVQYADYT LWHQDVLGSE SDQDSLISKQ IEYWREALKG LPDEINLPVD
RTRPAIESHR GAEVEFALSG ELHAGLKALA RNERVTLFML FHSTLAALLY RLGAGTDIAI
GSPVAGRMDA ALEDLVGFFV NTLVFRIDTA DNPTFRELCG RVRDITLDAY AHQDLPFERL
VELLNPSRSL AKHPLFQVLL VLHNNLEANL AFDGVDASIE KVNVTSAKFD LSFALREQFD
ADKAPAGIFG AIEYATDLFD RDTVEAFADR FIRLLEAIVS DPEQRLDEID LLDPDERHKV
LVEWNDTRRP ISEALLPELF QAQVARTPDA IAVVDRDHVL TYRDLETQAN RLAHYLVNLG
VGPDRPVVIC IERCIDVAVG LLAILKAGGA YVAVDPVYPK DRIDFVARDA RPAVVITMSR
HAELFVGLHP SVPVISIDAD HNEWSTMSGA PPEMGGNDSR LAYICYTSGS TGTPKGVMID
HAAVVRTVMA TDYANFGVRE TFLQFAPLAF DASTFEIWGA LLNGGRLVFA PPGKVGLDEV
CDLVQKFNVT TLWLTAGIFQ LLSEEHLQCL FSLRQLLAGG DVLSLDTINR VNKALPNCQV
INGYGPTEAT TFSVCHAFPK GIATEIPIGK PIANTKVYVL DKCLAPVPIG VVGELYIAGR
GVGRGYLNHP SLTCEKFISS PFGDSGDRLY RTGDLVRWGR DGLLRFLGRA DEQVKIRGFR
IEPGEIEATL LSHPSVSQAV VIAREDSSGD KKLLGYVVSQ SGSLIDAQAL RQFLRDRLPD
YMVPAAIIAL DRLPLSPNGK LDRKALPSPT YEVSVGREPS TPQEELLCGL FAEVLGLNQV
GIDDNFFDLG GHSVLAMRLM ARIRQTFGTT VALRTIFEAS TVSALSLYLE TKNIASNELP
PISVHSERKA PVTPSQHRLW DKAKKATSDS AARIDHSSEN LVQTLEIVGN LDVGAFLKAS
DALVKKHEAL RTVFSDSNNM AYQEAHANEI CVASYFDLVG YTIEEIEEKK KDFGVKPFDL
STSLPLRVGI FKLQDKKFHV IFVVHHIVAD GWSIGIMNAD FEALYNHVAA GRALSQSNNG
RHAYQYIDYA HWLQQRLDQG DFEDQFLYWK KKLQDLPSLA VCVTKEPHDG RDTVEANKLM
FAIEPSTRGD VIGLAKEART TPFGVFMTAL RILVWIETGA KDIAVQAPVA NRRDPDTHLI
LGRFFNYIAV RSELAENETA ISTIRNNHSS FVEAQENQEV PFELIYEAIT GGKELFKRPL
AEYAITMEPA GKPLTLDGVN VESIPSVGVE NLKRTLNLTL VESGTSLLCQ MRFDAKRFDK
VHSAMFRDDW LHILKLVTTD PGISLLTIRE KLVTSRRDSH D