Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9643 |
Symbol | |
ID | 7381860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011991 |
Strand | + |
Start bp | 108053 |
End bp | 115738 |
Gene Length | 7686 bp |
Protein Length | 2561 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643653303 |
Product | peptide synthetase |
Protein accession | YP_002551474 |
Protein GI | 222109209 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTAACA TTGAAGAGCT TCTCCCGCTA TCACCTTTGC AGAAGGGCCT TCTCTTCCAC TCACTTTATG ATGAGAGTGG TGTTGACGTC TATCACATCC AATTTACGAT CGAGCTGCGT GGCAAATGTG TGCCCGAGAA GCTGCGGAAA TGCGCTGACT TGCTTCTGCA TCGTTATCCG AACATCCGTG CTGGGTTCGA ATATGAGGAT TTGGACGATC CGCTGCAAGT CGTTCTAGAT ACCGTCGATC TTCCCTGGCA CACGGTCGAT ATCTCTGACC ACGAGGAGCG AGAAAAGGAA GGGATATTAG ATAAGATTTC CGCCTTTGAC CGGACAACAA GATTCAGAGC CGACAGGCCA CCATTGCTTC GCTTTACCTT CGTCAAACTG GATTCAGACA GAGCTTATCT TTTTTTTACG CACCATCATC TCATACTCGA CGGATGGTCG TTGCCTGTAT TTCTTCGTGA GCTGTTTGAG CTTTATGACT GTAATGGGGA AGTCGAAGCG CTACCGTCCG CTGCCTCTTA TCGAGACTAT CTCGACTGGA TGACCTCCGC AGATGGCGAA AGTTCTCGCG AGGCATGGAC GCAATATCTA CTCGATTACG ATTATCAGCG GAACGCGTTG CACGGCAATG TATACGACGC CCACCAGCCT CAGACGGTAC TACGAACAAT CAGTAGCTCG CTTACCCAGC AAGTTCTTAC GCTATCGCGA ACAGTTGGTG TCACGGACAG CACTATTATG CAGGCGGCTT GGGGAATTTT TCTCAGCCTG ATCGAGGCTC GAAGTGATGT TGTTTTCGGA GTGGTTGTAT CAGGTCGCCA TCCAGAAGTT CCTGACGTTG AGAGGATCGT GGGCTTGTTG GCAAACACGA TACCTCTTCG CTTCAGGGTG GACGGCAGTG AGAAGGTTAA GGCGTTACTC TGCAGGGTGC AATCCGAGCA AGCTGGCTTG ATCCAGTTTC ACTCGACAAG CCTCGGGGAT ATTCAAAGAT GGATCGGAAC CACGAATCTT CTGGAAAGCG TTGTGGTTTA TCAAAACTAT CCCCTAGGAG GAGAAAGTGT GTGGAGAGGA GAATCGTTCT CAGCTGAGTT TGTTGACTGC TCAGGGGGAC AATCGCACTA TCCGCTTCAT CTTTCGATTT TCCCGGGTAG ATCAACAGAG ATCAGGCTTA GTTACCAACC ACATTTGTTT GACCGCGACA CCGTAGAAGC GTTTGCCGAT CGGTTTATCC GCCTTCTGGA GGCTATTGTC TCCGATCCCG AACAACGCCT AGACGAAATC GATCTGTTAG ACCCCGACGA ACGTCACAAG GTTCTTGTAG AATGGAATGA CACGCGACGG CCGATTTCCC GGGAGTTGTT ACCTGAACTC TTCCAAGCCC AGGCTGCCCG CACACCTGAT GCTATCGCCC TTGAATGTGA AGGCGAGCAA ATTTCGTACG CCGAACTTGA GGCCCGCGCC AACCGGATGG CCCGGTATTT AATTGAGCTG GGCGTGGGAC CTGAGACGAT TGTCGCACTG GCGCTTCCAC GGTCAATCGA CATGGTTGTG TCTTTGCTGG CGGTTCTCAA GTCAGGTGGG GCTTATCTGC CTCTCGACCC GCAATATCCG ACCGAAAGAT TAGCGTTCAT GGTGGCTGAC GCGCAGCCCG CCACGGTAAT CGCGGTGGCA TCGACGGCAG AAAAGCTGCC TGAGGATGCT CCTCTCCTAC TTCTAGATGA CGCTGGAGTC CTCGAACGGA TCTCCGCATT TTCCGATTCC GCGGTCATCG AGACAGAACG GCACGCGCCG CTCGACCCAC TACATCCCGC CTATGTCATC TATACATCCG GATCAACCGG AAAACCCAAA GGCGTGGTTG TGAATCATTC GGGGTTCACA AATTTCCTTG CCGCGATGAC TGAAATCTTC GATCCATTCG CGCAAACACC GTTTTATGCG ACCACGTCAA TCGCTTTTGA TATCGCCGGT ATGGAACTCT TTCTGCCGCT TGCCACCGGA GGCCGGCTGA ATCTCTCAGC CCAGTCCGCC GCGTTGCAAG CCCAGGAGAC GGTTCGTGCA TTAACAAATG CTCCATCTGG CTTGTTCCAG GCAACACCGT CTGCTTACAG GAATCTCGCC GAAGTTCATT CGGCGGGGAA TGTAGCGGCT TTGTGCGGGG GTGAACAGCT TACGAGCGAC CTAGCACAAC AAATTCTTAG CACGTACGGA AGTCTTCATA ATCTCTACGG GCCGACCGAA ACGACAATAT GGTCTCTTTG CGCAGCTATC AGCGATGTGG AATCCGAGGG TTCGGTTCCG ATTGGGCGCC CGATTTCGAA TACATTTGTT TATGTCCTCA ATGATACTTT GCAACTGGTT CCGCCTGGGG TTGTCGGGGA GCTTTACATA GCGGGAGCAG GCCTGGCGCG AGGTTATCTG CGTCGGCCCG GCCTGACTGC CGAACGGTTT GTAGCTGATC CCTTTGGTGA GGCTGGCACG CGCATGTATC GGACTGGAGA CCTCGTCAAA TGGCGTAGCG ACGGTATTCT GGACTATTTA GGGCGGGCCG ACGAGCAGGT TAAGATCCGT GGTTTCCGTA TTGAGCCCGG GGAGATCGAG GCCGCTCTGC TCTCTCATCC TAGCGTTTCA CAAGCCGTCG TCATCGCGCG CGAGGATAGC TCCGGTGACA AAAAGCTTCT GGGATATGTG GTCAGTCAGT CGGGCTCTCT CATAGACGCA CAAGCATTGC GGCAATTTCT CCGCGATCGT CTTCCTGATT ATATGGTTCC AGCGGCGATC ATAGCGCTCG ATCGTCTTCC CCTGTCTCCA AATGGCAAAC TTGATCGCAA GGCTCTGCCG TCGCCTACTT ACGAGGTTTC AGTCGGCCGG GAACCTTCGA CCCCACAGGA GGAGCTTCTT TGTGGCCTTT TCGCTGAAGT CCTGGGGTTA AATCAGGTAG GTATCGACGA TAACTTCTTC GACCTGGGGG GACATTCACT ACTTGCTACT CGCCTAATAT CTCGAATCCG CTCCACCTTC AGCCGTGAGG TTGCTATCCG AACGCTTTTC GAGGCCCCGA CCGTTGCTCA ATTAGATCGA TACCTCAATA AGTCGGATAC CGCGCGGACG GCATTGCAAA AACAGATGCG ACCGCCGCGT CTTCCTCTGT CTCCGGCGCA GCGTCGCCTT TGGCTTCTAG ACCGGATTGA TGGTCATAGC TCGACATATA ATATTCCGAT CGCCCTGCAC CTGAACGGCG ATATAGAGAT ATCTGTCCTA AAGTCATGCT TGAAAGACAT CCTACTAAGG CACGAAAGCC TAGCGACTAC TTTCGTAGAG GTTGAAGGAA TTCCCCACCA AGAGGTGGTA TCCGCTGACA ATTTAAATAT TGATATTATC ACAAAGAAGA TTGCCCATGA GAATCTCAGT ACTGCACTTG TAGCTGCCGC AAACTATAAC TTCGATCTCT CGATAGATGT CCCAATACGA CCTTATCTAT TCCAACTCGG CCAAAATGAA TATGTGCTCC TGATCCTCCT GCACCATATC GCCGCCGATG GATGGTCGAT GTTTCCGCTG TTGAGAGATC TTTCTGCTTC CTACAATGCT CGGAGCAAAG GAAAAGAGCC TGAATGGACC CCTTTGTCGG TTCAGTATGC CGACTATACA CTGTGGCATC AAGACGTCTT AGGCAGCGAA AGCGACCAGG ATAGTCTCAT TTCAAAGCAA ATTGAGTATT GGCGAGAAGC GCTTAAGGGC CTTCCGGACG AGATCAATCT ACCAGTCGAT CGAACCAGGC CCGCAATAGA AAGCCATCGC GGGGCGGAGG TGGAATTTGC TCTTTCTGGG GAGCTTCATG CCGGCTTGAA AGCCTTGGCA AGGAACGAGC GTGTAACATT ATTTATGCTC TTCCATAGCA CCCTCGCAGC GCTCCTTTAT CGGTTAGGCG CGGGGACAGA CATTGCGATT GGGAGCCCGG TAGCGGGACG CATGGATGCT GCTCTTGAGG ACCTCGTCGG ATTTTTCGTC AACACCCTCG TATTCCGTAT AGACACTGCC GATAATCCCA CGTTCCGCGA GCTATGTGGC CGGGTTAGGG ATATTACACT TGATGCTTAT GCACACCAAG ATCTACCCTT CGAGCGGCTG GTCGAGCTTT TGAACCCAAG CCGTTCTTTA GCAAAGCATC CCCTCTTTCA AGTCCTTCTA GTGCTTCACA ACAACCTTGA GGCCAATCTC GCATTTGATG GCGTCGACGC CTCAATTGAA AAGGTAAACG TAACCTCCGC CAAATTCGAC CTCTCTTTTG CCCTCCGAGA ACAGTTCGAC GCGGATAAGG CACCTGCCGG CATCTTCGGC GCAATCGAAT ATGCAACAGA CCTTTTTGAT CGCGACACCG TAGAAGCGTT TGCCGATCGG TTTATCCGCC TTCTGGAGGC TATTGTCTCC GATCCCGAAC AACGCCTAGA CGAAATCGAT CTGTTAGACC CCGACGAACG TCACAAGGTT CTTGTAGAAT GGAATGACAC GCGGCGGCCG ATTTCCGAAG CGCTGCTGCC GGAACTCTTT CAGGCTCAGG TCGCCCGTAC ACCTGATGCC ATTGCCGTCG TTGATCGCGA CCACGTTCTT ACTTATAGGG ATCTTGAGAC CCAAGCAAAT CGTTTGGCCC ACTACCTCGT AAATTTAGGT GTGGGTCCAG ATCGTCCTGT AGTCATATGC ATCGAACGTT GTATCGACGT CGCGGTTGGC CTCTTAGCAA TTCTGAAAGC GGGCGGCGCA TACGTAGCTG TAGATCCCGT CTACCCGAAA GACCGCATCG ATTTTGTCGC ACGGGATGCC CGACCAGCGG TGGTCATTAC GATGTCCCGG CACGCTGAGT TATTTGTAGG ACTGCATCCT TCCGTCCCAG TGATCTCGAT CGATGCCGAT CACAATGAGT GGAGTACGAT GTCAGGCGCG CCCCCTGAGA TGGGAGGGAA TGACTCTCGT CTCGCTTATA TCTGCTACAC CTCCGGCTCA ACCGGCACTC CGAAAGGAGT TATGATAGAC CATGCCGCAG TCGTCCGAAC CGTGATGGCG ACCGACTATG CGAATTTTGG CGTTCGCGAA ACGTTTCTTC AATTCGCCCC ACTAGCCTTT GACGCTTCAA CTTTCGAGAT CTGGGGTGCT CTCCTCAATG GTGGCCGCTT GGTATTCGCT CCGCCCGGAA AGGTTGGCCT TGATGAGGTT TGTGATCTTG TGCAGAAATT TAACGTGACG ACTTTGTGGC TTACGGCCGG CATCTTTCAA CTCCTTTCCG AAGAGCATCT GCAGTGCCTG TTCTCCCTCC GGCAACTGCT GGCGGGAGGG GACGTATTGT CCCTCGATAC GATAAACCGG GTTAACAAAG CTCTTCCCAA TTGCCAGGTA ATCAATGGCT ACGGCCCAAC GGAGGCGACA ACATTTTCAG TGTGCCACGC CTTTCCGAAA GGGATCGCGA CTGAAATACC GATTGGGAAA CCAATTGCGA ATACAAAGGT CTATGTCCTC GACAAATGTC TTGCCCCGGT TCCAATTGGA GTGGTTGGCG AACTTTATAT TGCAGGAAGA GGCGTAGGGC GTGGCTACCT AAACCACCCC TCGCTTACAT GTGAAAAGTT CATTAGTAGT CCGTTTGGAG ATTCGGGAGA CCGTCTTTAC CGAACCGGAG ATTTAGTCCG ATGGGGCCGA GACGGCCTAC TGAGGTTTCT CGGGCGGGCC GACGAGCAGG TTAAGATCCG TGGTTTCCGT ATTGAGCCCG GGGAGATCGA GGCCACTCTG CTCTCTCATC CTAGCGTTTC ACAAGCCGTC GTCATCGCGC GCGAGGATAG CTCCGGTGAC AAAAAGCTTC TGGGATATGT GGTCAGTCAG TCGGGCTCTC TCATAGACGC ACAAGCATTG CGGCAATTTC TCCGCGATCG TCTTCCTGAT TATATGGTTC CAGCGGCGAT CATAGCGCTC GATCGTCTTC CCCTGTCTCC AAATGGCAAA CTTGATCGCA AGGCTCTGCC GTCGCCTACT TACGAGGTTT CAGTCGGCCG GGAACCTTCG ACCCCACAGG AGGAGCTTCT TTGTGGCCTT TTCGCTGAAG TCCTGGGGTT AAATCAGGTA GGTATCGACG ATAACTTCTT CGACCTGGGG GGACATTCTG TCCTTGCTAT GAGGCTCATG GCACGTATTC GCCAAACTTT CGGAACCACT GTAGCCTTAC GCACGATATT TGAAGCATCA ACCGTTTCTG CCTTATCACT TTATCTTGAG ACTAAGAATA TAGCTAGTAA TGAACTTCCG CCGATTTCCG TGCATTCTGA ACGCAAAGCG CCGGTGACTC CCAGCCAGCA TCGACTTTGG GATAAAGCAA AAAAAGCTAC GAGCGATTCT GCAGCACGTA TTGATCACAG CTCTGAAAAC CTCGTCCAAA CCCTCGAAAT TGTCGGAAAT CTTGATGTCG GAGCATTCTT GAAAGCCAGC GACGCCTTGG TAAAGAAGCA CGAAGCACTT CGGACGGTAT TCAGCGACAG TAATAATATG GCTTATCAGG AAGCGCATGC GAACGAGATC TGCGTAGCAA GTTACTTTGA CCTAGTTGGA TATACCATTG AGGAGATAGA GGAAAAAAAG AAGGATTTTG GAGTCAAGCC ATTCGACCTC TCAACTAGTC TTCCTCTTCG AGTCGGAATC TTCAAGCTTC AAGACAAAAA ATTTCATGTC ATTTTTGTGG TTCACCACAT CGTAGCTGAC GGGTGGTCAA TAGGAATAAT GAATGCTGAT TTCGAGGCCC TGTATAACCA CGTTGCTGCA GGTAGGGCTT TGTCTCAGAG CAATAATGGG AGGCACGCTT ATCAATACAT CGACTATGCG CACTGGCTCC AACAACGGCT TGATCAGGGC GATTTCGAGG ATCAGTTTCT ATATTGGAAG AAAAAGCTAC AGGACCTTCC CAGCTTGGCC GTCTGCGTGA CGAAAGAACC TCACGATGGT CGCGACACGG TTGAAGCGAA CAAGTTGATG TTCGCGATCG AGCCTTCGAC CCGTGGAGAC GTAATTGGCC TCGCGAAAGA AGCTAGAACG ACCCCCTTTG GTGTATTCAT GACAGCGCTC CGGATTCTTG TTTGGATCGA AACTGGTGCC AAAGACATCG CAGTTCAGGC TCCGGTCGCA AACCGCAGAG ATCCAGATAC CCATCTGATA TTAGGTAGGT TCTTTAACTA CATTGCAGTT CGTTCGGAGC TCGCTGAAAA TGAGACAGCG ATCTCAACAA TTCGGAACAA CCATTCGTCT TTTGTTGAGG CGCAAGAAAA TCAAGAGGTG CCTTTTGAGT TGATATACGA AGCAATCACT GGCGGCAAAG AGCTTTTTAA ACGTCCGCTG GCGGAATATG CGATTACTAT GGAACCTGCT GGGAAGCCGC TGACTTTGGA CGGCGTAAAT GTGGAATCAA TTCCCAGCGT CGGGGTTGAG AACCTGAAAC GAACACTGAA TTTGACTCTC GTTGAGAGCG GTACATCGCT TCTTTGTCAG ATGAGGTTTG ATGCGAAGCG TTTCGACAAA GTGCACAGCG CTATGTTCCG TGACGATTGG CTGCATATTT TAAAGTTGGT CACAACTGAC CCCGGAATTT CTTTGTTAAC TATTAGAGAG AAGCTAGTCA CGTCTAGACG TGATTCTCAT GACTAG
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Protein sequence | MPNIEELLPL SPLQKGLLFH SLYDESGVDV YHIQFTIELR GKCVPEKLRK CADLLLHRYP NIRAGFEYED LDDPLQVVLD TVDLPWHTVD ISDHEEREKE GILDKISAFD RTTRFRADRP PLLRFTFVKL DSDRAYLFFT HHHLILDGWS LPVFLRELFE LYDCNGEVEA LPSAASYRDY LDWMTSADGE SSREAWTQYL LDYDYQRNAL HGNVYDAHQP QTVLRTISSS LTQQVLTLSR TVGVTDSTIM QAAWGIFLSL IEARSDVVFG VVVSGRHPEV PDVERIVGLL ANTIPLRFRV DGSEKVKALL CRVQSEQAGL IQFHSTSLGD IQRWIGTTNL LESVVVYQNY PLGGESVWRG ESFSAEFVDC SGGQSHYPLH LSIFPGRSTE IRLSYQPHLF DRDTVEAFAD RFIRLLEAIV SDPEQRLDEI DLLDPDERHK VLVEWNDTRR PISRELLPEL FQAQAARTPD AIALECEGEQ ISYAELEARA NRMARYLIEL GVGPETIVAL ALPRSIDMVV SLLAVLKSGG AYLPLDPQYP TERLAFMVAD AQPATVIAVA STAEKLPEDA PLLLLDDAGV LERISAFSDS AVIETERHAP LDPLHPAYVI YTSGSTGKPK GVVVNHSGFT NFLAAMTEIF DPFAQTPFYA TTSIAFDIAG MELFLPLATG GRLNLSAQSA ALQAQETVRA LTNAPSGLFQ ATPSAYRNLA EVHSAGNVAA LCGGEQLTSD LAQQILSTYG SLHNLYGPTE TTIWSLCAAI SDVESEGSVP IGRPISNTFV YVLNDTLQLV PPGVVGELYI AGAGLARGYL RRPGLTAERF VADPFGEAGT RMYRTGDLVK WRSDGILDYL GRADEQVKIR GFRIEPGEIE AALLSHPSVS QAVVIAREDS SGDKKLLGYV VSQSGSLIDA QALRQFLRDR LPDYMVPAAI IALDRLPLSP NGKLDRKALP SPTYEVSVGR EPSTPQEELL CGLFAEVLGL NQVGIDDNFF DLGGHSLLAT RLISRIRSTF SREVAIRTLF EAPTVAQLDR YLNKSDTART ALQKQMRPPR LPLSPAQRRL WLLDRIDGHS STYNIPIALH LNGDIEISVL KSCLKDILLR HESLATTFVE VEGIPHQEVV SADNLNIDII TKKIAHENLS TALVAAANYN FDLSIDVPIR PYLFQLGQNE YVLLILLHHI AADGWSMFPL LRDLSASYNA RSKGKEPEWT PLSVQYADYT LWHQDVLGSE SDQDSLISKQ IEYWREALKG LPDEINLPVD RTRPAIESHR GAEVEFALSG ELHAGLKALA RNERVTLFML FHSTLAALLY RLGAGTDIAI GSPVAGRMDA ALEDLVGFFV NTLVFRIDTA DNPTFRELCG RVRDITLDAY AHQDLPFERL VELLNPSRSL AKHPLFQVLL VLHNNLEANL AFDGVDASIE KVNVTSAKFD LSFALREQFD ADKAPAGIFG AIEYATDLFD RDTVEAFADR FIRLLEAIVS DPEQRLDEID LLDPDERHKV LVEWNDTRRP ISEALLPELF QAQVARTPDA IAVVDRDHVL TYRDLETQAN RLAHYLVNLG VGPDRPVVIC IERCIDVAVG LLAILKAGGA YVAVDPVYPK DRIDFVARDA RPAVVITMSR HAELFVGLHP SVPVISIDAD HNEWSTMSGA PPEMGGNDSR LAYICYTSGS TGTPKGVMID HAAVVRTVMA TDYANFGVRE TFLQFAPLAF DASTFEIWGA LLNGGRLVFA PPGKVGLDEV CDLVQKFNVT TLWLTAGIFQ LLSEEHLQCL FSLRQLLAGG DVLSLDTINR VNKALPNCQV INGYGPTEAT TFSVCHAFPK GIATEIPIGK PIANTKVYVL DKCLAPVPIG VVGELYIAGR GVGRGYLNHP SLTCEKFISS PFGDSGDRLY RTGDLVRWGR DGLLRFLGRA DEQVKIRGFR IEPGEIEATL LSHPSVSQAV VIAREDSSGD KKLLGYVVSQ SGSLIDAQAL RQFLRDRLPD YMVPAAIIAL DRLPLSPNGK LDRKALPSPT YEVSVGREPS TPQEELLCGL FAEVLGLNQV GIDDNFFDLG GHSVLAMRLM ARIRQTFGTT VALRTIFEAS TVSALSLYLE TKNIASNELP PISVHSERKA PVTPSQHRLW DKAKKATSDS AARIDHSSEN LVQTLEIVGN LDVGAFLKAS DALVKKHEAL RTVFSDSNNM AYQEAHANEI CVASYFDLVG YTIEEIEEKK KDFGVKPFDL STSLPLRVGI FKLQDKKFHV IFVVHHIVAD GWSIGIMNAD FEALYNHVAA GRALSQSNNG RHAYQYIDYA HWLQQRLDQG DFEDQFLYWK KKLQDLPSLA VCVTKEPHDG RDTVEANKLM FAIEPSTRGD VIGLAKEART TPFGVFMTAL RILVWIETGA KDIAVQAPVA NRRDPDTHLI LGRFFNYIAV RSELAENETA ISTIRNNHSS FVEAQENQEV PFELIYEAIT GGKELFKRPL AEYAITMEPA GKPLTLDGVN VESIPSVGVE NLKRTLNLTL VESGTSLLCQ MRFDAKRFDK VHSAMFRDDW LHILKLVTTD PGISLLTIRE KLVTSRRDSH D
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