| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9541 |
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| Symbol | |
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| ID | 7381909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011991 |
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| Strand | + |
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| Start bp | 39073 |
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| End bp | 44178 |
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| Gene Length | 5106 bp |
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| Protein Length | 1701 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643653245 |
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| Product | helicase SNF2 family |
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| Protein accession | YP_002551416 |
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| Protein GI | 222109151 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG4646] DNA methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.398827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACG ATCCTTTTAC TCTCGACATG TTCGGCAATA CCGCCCTTTC GTCCGGCCTT
GGTCTCGGCG TAACTGCCTT CGGCAGCTTT TCAACCCCAG CCAATGACGA TGATCCGGAG
CCGACGCCGC CCGCGCCCGC CGCGGCTATG TCCGTCGACT CTATGAAACA GCCGCCGCGC
AAACCGGGCC ATCGTGCCAA CTTCTATCTC GGCGAAGATG ACCGCGGTCT GGCTGCCAGC
TGGAAGGAAC GGGCACGGAT GAATGTTGCC GCGATCCTGA CCGCCAACGA AATCGAGAAT
CACAATATCC CGGTCACCCG CGCGCATCAG CAGAAACTGA TCCGCTTCGC CGGTTTTGGG
GCATCGGAGC TGGCAAACGG CATGTTCCGG CGCCCGGGCG AAGTTGGGTT TCGCAAGGGC
TGGGACGACC TTGGCAGCTC GCTCGAAACG GGCGTCTCCG GACTGGACTA CGCGTCACTG
GCGCGCTGCA CGCAGTATGC CCATTTCACA CCTGAGTTCA TCATCCGGGC GATCTGGTCG
GGCCTGCAGC GGCTCGGCTG GCTCGGTGGG CGGGTTCTGG AGCCTGGTAT AGGGACCGGC
CTGTTTCCTG CGCTGATGCC GGAAGCGTTC CGCTACAAAA GTTATGTCAC CGGGGTCGAG
CTCGATCCGG TCACCGCGCG CATCGTCCGC CTGCTGCAGC CGAAGGCACG TATCGTCAAC
GGCGATTTCA GCCGCACGGA TCTTGGCGTC ATCTACGATC TTGCCATCGG GAACCCTCCC
TTTTCCGATC GCGCCGTCCG CTCTGACCGC GCCTATCGGT CGCTCGGACT TCGGCTGCAT
GATTATTTTA TTGCCCGGTC GATCGATCTC CTGAAGCCCG GGGCACTGGC TGCCTTCGTC
ACCAGCTCGG GCACCATGGA CAAGGCTGAC TCCACGGCAC GCGGGCATAT TGCTAAGTCG
GCAGATCTGA TTGCCGCAAT TCGGTTGCCC GAAGGCAGCT TTCGCCGCGA CGCCGGCACG
GATGTGGTGG TCGATCTCCT GTTTTTCCGC AAGCGAAAAA TGGGCGAGGT AGAGGGAGAC
CTTTCCTGGC TCGATCTGCA AGAGGTACGG CCGGCAACCG CCGACGACGG CGCCATTCGT
GTCAACCGCT GGTTTGCCCG GCACCCGGAT TTTGTTCTGG GTGACCACGC GCTGACCTCA
GGGGCGTTTG GCGAGACCTA TACCTGCCTG CCGCGTGCTG GTGAGGATCT GGAGGCTGCC
CTGAATGCTG CCGTCTCTCT TCTCCCGGAA GACATCTATG ACGGCGAGCC GACGCCCGTA
GACATCGACC TGGAGGCCGA ACTCGGAGAT ATCGTCGACA TTCGGCCGCG CAACGACACG
GTCCGCGAAG GCAGCTTCTT TATCGACAAT GCCCGCGGCC TGATGCAGAT GGTCGACGGC
GCAGCGGTCG TCATTCCAGT TCGCAAGGGC CGGGCCGGTG AGGGTATCCC GGAAAAGCAC
GTTCGGATTA TCAGGAAACT GATCCCGATC CGCGATGCGG TGCGCGACGT GCTGAAGGCA
CAGGAGCAGG ATCGTCCCTG GCGTGATCTC CAGGTGCGGC TTCGCATCGC ATGGTCGAAC
TTCGTGCGGG ATTTCGGTCC GATCAATCAC ACGACCGTCT CGATCAGCGA AGACGCAGAA
ACAGACGAGG TCCGCGAAAC CCATCGCCAG CCAAATCTGC TGCCATTTCG CGACGATCCC
GATTGCTGGC TGGTCGCATC TATCGAAGAC TACGATCTCG AAACTGACAC GGCGAAACCC
GGCCCCATTT TTACCGAGCG AGTCATCGCT CCTCCCGCAC CGCCCGTGAT TACCAGTTCC
ACCGATGCGC TGGCTGTCGT CCTGAACGAG CGCGGCCATG TCGATCTCGA CCATATCGCC
GAATTGTTGC ATAGCGATCC TGCGGCGGTC ATCGCGGATC TCGGCGACGG CATTTTTCAA
AACCCGACGG ATGGGTCCTG GCAAATATCA GATGCTTATC TCTCTGGCTC GGTGCGCACG
AAACTGGCGT TCGCGGAGGC TGCGGCAGAG CTTGATCCGA CTTTCGGGCG CAATGTCCGG
GCGCTGCAGG CGGTTCAGCC CGCCGATCTA CGCCCCTCCG ATATTGCTGC CCGCCTCGGC
GCTCCATGGA TACCCGCCTC CGATATCGTT GCGTTCGTCA GGCAAACGAT GGAAGCCGAT
ATCCGTATCC ACCATATGCC GGAGCTCGGC TCATGGACGG TCGAAGCACG CCAGCTGGGC
TACAGCGCTG CTGGCACTTC GGAATGGGGC ACCGACCGCC GTTACGCCGG AGATCTGCTT
GCCGACGCTC TCAACAGCCG TGTGCCGCAG ATCTTCGACA CCGTCAAGGA TATTGACGGC
GAGCGCCGCA TCCTCAATGT CGTCGACACC GAAGCTGCGC GCGACAAGTT GCAGAAGATC
AAGCAGGCTT TCCAGAACTG GGTCTGGACC GATCCCGATC GCACCGACCG GCTGGCGCGG
GTCTATAACG ATCGCTTCAA CAATATCGCG CCGAGAGCCT TCGATGGTTC TCATCTGAAA
CTTCCCGGCG CATCGAGCGC CTTTGTTCTG TACGGGCATC AGAAGCGCGG CATCTGGCGT
ATCATCTCGT CCGGTTCGAC CTATCTCGCC CATGCCGTCG GCGCCGGCAA GACGATGACC
ATGGCAGCCG CGATCATGGA ACAGCGCCGG CTTGGACTGA TCGCCAAGGC GATGCTTGTC
GTACCCGGCC ATTGCCTGGC GCAGGCGGCG CGGGAATTTC TCGCACTGTA TCCGAACGCC
AACATCCTGG TGGCCGACGA GACGAATTTT ACCAAGGACA AGCGCGCCCG GTTCCTCAGC
CGCGCGGCGA CGGCGACATG GGATGCCATC ATCATCACCC ATTCGGCGTT CAGGTTCATT
GCCGTGCCGT CTGCTTTTGA ACAACAGATG ATCCACGACG AACTGGAGCT GTTCGAGGAC
CTGATGACCA GGGTCGAAAG CGATGACCGG GTGTCGCGGA AACGGCTCGA GCGCCTGAAG
GAAGGACTGC AGGAGCGGCT CGAAGCACTC GCGACCCGCA AGGACGATCT GCTGACGATC
TCGGAAATTG GTGTCGACCA GATTATCGTC GATGAGGCGC AGGAATTCCG AAAACTGTCG
TTTGCGACTA ATATGGCAAC GCTGAAGGGT ATCGATCCCA ACGGTTCCCA ACGTGCCTGG
GACCTGTTCG TCAAGTCGCG TTTTATCGAG ACGAAGAACC CCGGCCGGGC GCTCGTGCTG
GCATCGGGCA CACCGATCAC AAATACGCTT GGCGAAATGT TCTCGATCCA GCGCCTGCTC
GGCCACGAAG CTCTGCGCGA ACGGGGACTG CATGAGTTCG ACGCCTGGGC GAGCACCTTC
GGAGACACGG CAACGGCGCT GGAGATCCAG CCTTCCGGCA AATACAAGCC CGTCAGCCGC
TTTGCCAGCT TCGTTAACGT GCCGGAACTG ATCGCCATGT TCCGCAGCTT TGCCGATGTC
GTGATGCCGG ATGATCTGCG TCAGTACGTG AAGGTGCCTG CGATTTCGAC CGGCCGGAGG
CAGATCGTGA CCGCGAAGCC AACCCAGGCC TTCAGGAACT ATCAGACCAT CCTCGACGCC
CGTATCAAGG CGATCGAGCA GCGCGAGGGA CCTCCGAAAC CGGGGGACGA TATCCTGCTC
TCGGTCATCA CCGATGGCCG TCACGCGGCG ATCGATCTGC GGCTGGTTGA CACGGACAAT
GACAACGAGC CCGACAACAA GCTCAATCTC CTGGTCGAGA ACGCGTTTCG CCTTTGGCAG
GACACGTCGC AGAACACCTA CTTGAAACCG GACGGTAAAC CGTACGAACT TCCCGGCGCT
GCCCAGATGA TTTTTTCCGA TCTCGGCACC ATCAACGTCG AGAAATCACG CGGCTTCTCC
GCCTATCGCT GGATCCGTGA CGAGCTCATC CGCATGGGCG TCCCGCCGGC GGAAATCGCC
TATATGCAGG ACTACAAGAA GACGGAGGCG AAGCAACGTC TGTTCGGCGA TGTGCGGGCC
GGCAAGGTCC GGTTCCTGAT CGGCAGTTCC GAGACAATGG GCACCGGCGT CAATGCTCAA
CTCCGGCTGA AGGCCCTCCA CCATCTCGAC GTTCCCTGGC TCCCGTCGCA GATCGAGCAG
CGCGAGGGTC GCATCGTCCG TCAGGGCAAC CAGCATGACG AGGTCGATAT CTTCGCCTAT
GCCACGCAAG GATCTCTCGA TGCCAGCATG TGGCAGAATA ACGAGCGCAA GGCGCGCTTT
ATCGCTGCCG CCTTGTCGGG CGACACGTCG ATCCGCCGTC TTGAAGACAT GGGCGAAGGG
CAGGCCAACC AGTTCGCCAT GGCCAAGGCC ATCGCATCCG GTGACGAGCG TCTGATGCAG
AAGGCCGGGC TCGAGGCCGA TATCGCCCGC CTCGATCGGT TGCGTGCAGC CCATGAGGAC
GACCAGTATG CGGTGCGGCG TCAAATACGC GATGCAGAGC GTGATATCGA AGTCTCAACG
CGCCGCATCA GCGGAATTGG CGAGGATATC AAACGGCTTG TTCCAACCGC AGGCGATGGG
TTCGCGATGA TAGTCGCCGG TAAGCCTTAC GACGAGCGGA AACTCGCCGG GCGTGCCCTG
ATGAAGGAGA TCCTCACCCT TTTGCAGCTT CGCCAGCAAG GTGAGGTTAC CCTCGGCACA
ATTGGCGGCT TCGATCTTGT CTATGACGGC GAAAGGTTTG GCAAGGGCGA AGGCTATCGT
TTCCAGACGC TGCTTCAGCG CACCGGCGCG GACTACGATA TCGACCTCGA TGTGACCGTC
ACGCCGCTGG GTGCCATTTC GCGCCTCGAA CATGCGCTAG GCGATTTCGA CGGCGAACAA
CAGCGCTATC GCCAACGCCT CGAAGAGGCT TACCGGCGAC TTGCCTCCTA TCGTTCCCGC
GAAGGCGGTC AGTTTGCCTT CGCTGAGGAG CTGGCGGACA AGCGGGAGGC GCTCCGCAAG
ATTGAAGAGG CACTTGCGAC GTCAGCACTC GCCGAAAACA CGCGTGCGAC GTCACGGCTG
TCCTAA
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| Protein sequence | MSNDPFTLDM FGNTALSSGL GLGVTAFGSF STPANDDDPE PTPPAPAAAM SVDSMKQPPR
KPGHRANFYL GEDDRGLAAS WKERARMNVA AILTANEIEN HNIPVTRAHQ QKLIRFAGFG
ASELANGMFR RPGEVGFRKG WDDLGSSLET GVSGLDYASL ARCTQYAHFT PEFIIRAIWS
GLQRLGWLGG RVLEPGIGTG LFPALMPEAF RYKSYVTGVE LDPVTARIVR LLQPKARIVN
GDFSRTDLGV IYDLAIGNPP FSDRAVRSDR AYRSLGLRLH DYFIARSIDL LKPGALAAFV
TSSGTMDKAD STARGHIAKS ADLIAAIRLP EGSFRRDAGT DVVVDLLFFR KRKMGEVEGD
LSWLDLQEVR PATADDGAIR VNRWFARHPD FVLGDHALTS GAFGETYTCL PRAGEDLEAA
LNAAVSLLPE DIYDGEPTPV DIDLEAELGD IVDIRPRNDT VREGSFFIDN ARGLMQMVDG
AAVVIPVRKG RAGEGIPEKH VRIIRKLIPI RDAVRDVLKA QEQDRPWRDL QVRLRIAWSN
FVRDFGPINH TTVSISEDAE TDEVRETHRQ PNLLPFRDDP DCWLVASIED YDLETDTAKP
GPIFTERVIA PPAPPVITSS TDALAVVLNE RGHVDLDHIA ELLHSDPAAV IADLGDGIFQ
NPTDGSWQIS DAYLSGSVRT KLAFAEAAAE LDPTFGRNVR ALQAVQPADL RPSDIAARLG
APWIPASDIV AFVRQTMEAD IRIHHMPELG SWTVEARQLG YSAAGTSEWG TDRRYAGDLL
ADALNSRVPQ IFDTVKDIDG ERRILNVVDT EAARDKLQKI KQAFQNWVWT DPDRTDRLAR
VYNDRFNNIA PRAFDGSHLK LPGASSAFVL YGHQKRGIWR IISSGSTYLA HAVGAGKTMT
MAAAIMEQRR LGLIAKAMLV VPGHCLAQAA REFLALYPNA NILVADETNF TKDKRARFLS
RAATATWDAI IITHSAFRFI AVPSAFEQQM IHDELELFED LMTRVESDDR VSRKRLERLK
EGLQERLEAL ATRKDDLLTI SEIGVDQIIV DEAQEFRKLS FATNMATLKG IDPNGSQRAW
DLFVKSRFIE TKNPGRALVL ASGTPITNTL GEMFSIQRLL GHEALRERGL HEFDAWASTF
GDTATALEIQ PSGKYKPVSR FASFVNVPEL IAMFRSFADV VMPDDLRQYV KVPAISTGRR
QIVTAKPTQA FRNYQTILDA RIKAIEQREG PPKPGDDILL SVITDGRHAA IDLRLVDTDN
DNEPDNKLNL LVENAFRLWQ DTSQNTYLKP DGKPYELPGA AQMIFSDLGT INVEKSRGFS
AYRWIRDELI RMGVPPAEIA YMQDYKKTEA KQRLFGDVRA GKVRFLIGSS ETMGTGVNAQ
LRLKALHHLD VPWLPSQIEQ REGRIVRQGN QHDEVDIFAY ATQGSLDASM WQNNERKARF
IAAALSGDTS IRRLEDMGEG QANQFAMAKA IASGDERLMQ KAGLEADIAR LDRLRAAHED
DQYAVRRQIR DAERDIEVST RRISGIGEDI KRLVPTAGDG FAMIVAGKPY DERKLAGRAL
MKEILTLLQL RQQGEVTLGT IGGFDLVYDG ERFGKGEGYR FQTLLQRTGA DYDIDLDVTV
TPLGAISRLE HALGDFDGEQ QRYRQRLEEA YRRLASYRSR EGGQFAFAEE LADKREALRK
IEEALATSAL AENTRATSRL S
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