Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4382 |
Symbol | |
ID | 7387956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 3715400 |
End bp | 3715924 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643653026 |
Product | hypothetical protein |
Protein accession | YP_002551197 |
Protein GI | 222150240 |
COG category | [S] Function unknown |
COG ID | [COG5468] Predicted secreted (periplasmic) protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCGTCTG ATTCACGCGT AAATCTATCC CGTCGCGCGG TTCTTGCCGC GTCCGTTGGT CTGCTTGGCG CCCTCGCGGG TTGTCAGGTC AGGCCGCTCT ATGGGGAGGC TCTTGGCACC CGTAAGCTGA TGGCCTCCAT TGGCTTCTCT CCAGCAACGG ACAGGGTGGG GCAGGAGGTT CGCAACCGAT TGATCTTCCT CGCCGCTGGC GGGCAGGGCG AGCCGGCGCA TCCTGAATAT CTCGTCACCC TGGTCGTTCA TACCGACACG ACGGAAGTCC TGATCAACGA AAGTACCGAC CGTGCGACAG CCGGTCGCGT GACAGTCAGC GCAGACTATA CATTGAAGAA GGCAAGTGAC CTTTCGGTTA TGCGTATTGC CCATCGCCAG TCCGTCGCGC TGGTTGATTT TCCGACCCAG GAGTTTGCCA AGCTTCGCGC TGTAAGAGAT GCTGAAAATC GCGCTGCGCG GGAATTGGCA GAGTTGATCT CTGCAGATTT GGCTAGCCTG CTGGTTCGTA AATAA
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Protein sequence | MSSDSRVNLS RRAVLAASVG LLGALAGCQV RPLYGEALGT RKLMASIGFS PATDRVGQEV RNRLIFLAAG GQGEPAHPEY LVTLVVHTDT TEVLINESTD RATAGRVTVS ADYTLKKASD LSVMRIAHRQ SVALVDFPTQ EFAKLRAVRD AENRAARELA ELISADLASL LVRK
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