Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4344 |
Symbol | phbA |
ID | 7386578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 3660749 |
End bp | 3661975 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643652994 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_002551165 |
Protein GI | 222150208 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACAGTCT CAGCCGCAGC AAAGAACACT ATCGAGGAGA TACCCATGTC TACGCCTTCC ATCGTCATTG CCAGCGCGGC TCGAACGGCA GTTGGCTCTT TCAACGGGGC ATTTGCCAAC GTTGCCGCGC ATGATCTGGG TGCGACCGCG ATCAAGGCCG TGCTGGAACG CGCCGGCATT GAGGCCGCCG AAGTCGACGA AGTGATCCTC GGCCAAATCC TGACCGCCGG CCAGGGCCAG AACCCCGCCC GCCAGGCCGC CATGAAGGCT GGCATTCCGC AGGAAAAAAC TGCCTGGGGC CTAAACCAGC TCTGCGGCTC CGGCCTGCGC GCCGTGGCAC TCGGCATGCA GCAGATCGCC ACCGGCGACG CCTCCATCAT CATTGCTGGC GGCCAGGAAT CCATGTCGCT TGCTCCCCAC TGCGCCCATT TGCGCGCCGG CACCAAGATG GGCGACATGA AAATGATCGA CACCATGATC AAGGACGGCC TGACCGATGC CTTCTACGGC TATCACATGG GTGTCACCGC CGAAAATGTT GCCCGCCAGT GGCAGTTGAC CCGCGATGAG CAGGACGCCT TTGCGGTTGC CTCGCAAAAC AAGGCTGAAG CCGCCCAGGC CGCAGGTCGG TTCAAGGACG AAATCGTCCC GGTCACTGTG CCAGGCCGCA AGGGCGATGT GATCGTCGAT GCCGATGAAT ATATCCGCGC AGGTGCGACC CTGGACAGCA TGACCAAGCT GCGTCCCGCT TTCGACAAGG AAGGCACCGT CACCGCCGGG AATGCATCTG GCATTAATGA CGGAGCCGCC GCCGCCCTGC TGATGACCGA AGCTGAAGCC GTCCGTCGCG GCATCCAGCC ATTGGCGCGC ATCGCCTCCT GGGCCACAGC TGGCGTCGAT CCGAAGATCA TGGGCACAGG TCCGATCCCC GCATCCCGCA AGGCGCTTGA AAAGGCTGGC TGGAGCGTGA ACGATCTCGA TCTCGTCGAG GCCAACGAAG CCTTTGCCGC CCAGGCCTGC GCCGTCAACA AGGATCTTGG CTGGGATACG TCAATCGTCA ATGTCAATGG CGGCGCCATT GCCATCGGCC ACCCGGTCGG GGCGTCTGGT GCCCGTATTC TCAACACCCT GCTGTTTGAA ATGAAACGGC GCGGCGCAAA GAAGGGTCTG GCGACCCTGT GCATCGGTGG TGGCATGGGC GTTGCCATGT GCATCGAAGG TCTCTGA
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Protein sequence | MTVSAAAKNT IEEIPMSTPS IVIASAARTA VGSFNGAFAN VAAHDLGATA IKAVLERAGI EAAEVDEVIL GQILTAGQGQ NPARQAAMKA GIPQEKTAWG LNQLCGSGLR AVALGMQQIA TGDASIIIAG GQESMSLAPH CAHLRAGTKM GDMKMIDTMI KDGLTDAFYG YHMGVTAENV ARQWQLTRDE QDAFAVASQN KAEAAQAAGR FKDEIVPVTV PGRKGDVIVD ADEYIRAGAT LDSMTKLRPA FDKEGTVTAG NASGINDGAA AALLMTEAEA VRRGIQPLAR IASWATAGVD PKIMGTGPIP ASRKALEKAG WSVNDLDLVE ANEAFAAQAC AVNKDLGWDT SIVNVNGGAI AIGHPVGASG ARILNTLLFE MKRRGAKKGL ATLCIGGGMG VAMCIEGL
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