Gene Avi_4340 details

Gene Information

• Locus tag: Avi_4340
• ID: 7386575
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 3658776
• End bp: 3659435
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643652991
• Product: glutathione S-transferase
• Protein accession: YP_002551162
• Protein GI: 222150205
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0625] Glutathione S-transferase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGACC TAACCCTTTA TATTGCCAAT AAGAATTATT CCTCCTGGTC GTTCCGGCCC 
TGGATCGCTC TGACCGCAGC CGGGATCGAC TTCAAAGAGG TGCTGATCCG CTTCGACTTT 
CCAGCCGGCA ATCCGGGCAT CAAGGCGATA TCCCCGACCG GCCAGGTGCC AGTCCTTGTG 
CATGGGGATG TGAAGGTCTG GGAATCGCTG GCCATTATCG AATATGCTGC GGAGCTTTTC 
CCCAATGCCG GTATCTGGCC ATCGGCGCAG TCGGACCGGG CTGTTGCTCG AGCAATTTCG 
CTCGAAATGC TGGCTGGCTT CCGGGCCTTG CGCAATGCCT GCCCGATGAA TTTCCGTCGC 
CCGCCACAGG CGCTTGCCTT CAGCCCTGAG ACACAGGCAG CCGTGATGGC GGATGTCTCC 
CGCATCGAAA CCATCTGGCG CGAGCAATTG GCCCGTTCCG GCGGTCCTTT CCTGTTTGGT 
GCCTTCAGCG CTGCGGATGC CATGTATGCA CCTGTGGTCA ACCGTTTTTC AGCCTATCAA 
CTGACCTCTG ATCCGGTTAG TCTTGCCTAT ATGGATCGCA TGCAGGCCCA TCCCGCCTGG 
ATCAAGTGGC GCGATGCTGC CCTGGCCGAA CCCTGGATCG TGCCGGAGGA CGAAGCCTGA 

 

Protein sequence

MTDLTLYIAN KNYSSWSFRP WIALTAAGID FKEVLIRFDF PAGNPGIKAI SPTGQVPVLV 
HGDVKVWESL AIIEYAAELF PNAGIWPSAQ SDRAVARAIS LEMLAGFRAL RNACPMNFRR 
PPQALAFSPE TQAAVMADVS RIETIWREQL ARSGGPFLFG AFSAADAMYA PVVNRFSAYQ 
LTSDPVSLAY MDRMQAHPAW IKWRDAALAE PWIVPEDEA