| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4288 |
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| Symbol | rplU |
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| ID | 7386532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3602877 |
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| End bp | 3603191 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643652947 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_002551119 |
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| Protein GI | 222150162 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.997468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCGCAG TCATCAAGAC CGGCGGTAAG CAGTACCGCG TAGCCGCCAA CGACGTGCTG
ACCATCGAAA AGCTGGAAGC CGAAGCTGGT GCTATCGTTG AATTCACCGA AATTCTCGTT
GTTGGCGTTG GTGCCGATGC GACGATCGGT GCGCCTTTTG TTGCTGGTGC AACCGTGAAG
GCTGAAGTTG TCGAGCATAA CCGTGGCAAG AAGGTGATCG CGTTCAAAAA GCGTCGTCGC
CAGAATTCCA AGCGGTCGCG CGGCCATCGC CAGCACCACA CAGTCGTTCG CATCACCGAC
ATCGTCGCTG CGTAA
|
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| Protein sequence | MFAVIKTGGK QYRVAANDVL TIEKLEAEAG AIVEFTEILV VGVGADATIG APFVAGATVK
AEVVEHNRGK KVIAFKKRRR QNSKRSRGHR QHHTVVRITD IVAA
|
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