Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4245 |
Symbol | trx |
ID | 7386499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3568078 |
End bp | 3569082 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643652913 |
Product | thioredoxin |
Protein accession | YP_002551086 |
Protein GI | 222150129 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.902531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGATGA GCAATTCTGG TAATCCATAT GGCGGCTCCT ATGGCGGGCA GATGACGGCC AATGCGCAAT TTGGCGCAGC ACCTGCTGCG GCAGCGCCAG CGTCTGCAGG AGCATCGCCC GCCGGTGGTC TGATCAAGGA TACGACGACC CAGGGCTTTG CCAAGGATGT GCTGGAAGAA TCCCGCCGCC AGCCCGTCCT GGTGGATTTC TGGGCGCCCT GGTGTGGCCC TTGCCGCCAG TTGACGCCGA TCATCGAAAA GGCGGTCAAT GAGGCCAAGG GCAAGGTCAA GCTGGTCAAG ATGAATATCG ACGAGCATCC GGCCATTGCC GGCCAGCTTG GCATCCAGTC CATTCCTGCC GTCGTCGCCT TTGTCGATGG CCGTCCTGCC GATGGCTTCA TGGGCGCGCT GCCGGAAAGT CAGGTCAAGC AGTTCATCGA CAAGCTCGGT GGCCCGGACG GCGGTGCCGA TCAGGCAGCG GAAATCGAGG CTGTGCTGGT AGAAGCCAAG GGGCTTTACG ACGACGGCGA TTTCGACGGC GCTGCCCAGC TCTATGCGGC CGTCATGCAG GCCGATCCGG AAAATGCCAA GGCGGTTGCT GGTATTGCCG AATGCATGCT GGCCCTCAAC CAGCATGAAC GGGTGCGCCA GATTGTCGAT GGCCTGCCCG AAGAGCTGGC GAAAGCCCCG GAAATCCAGG CCGTGGCGAA AAAGCTGGAG CAAATCGAGG AGGCTCGCAA GCTGGGCGAT CCGGTGGCGC TGGAGCAGCA ACTGTCGCTT AACCCTGACG ATCACGAGGC GCGGCTGAAA CTCGCCAAGA TCCGCAATGT AGAGGGCAAG CGTGAAGACG CAGCCGATCA TCTGCTGTTG ATTATGAAAA AAGACCGGAC CTTCGACGAT GATGGTGCGC GTCGCCAACT GGTTGAATTT TTCGAGGTCT GGGGTCCGAA GGACCCCGCC ACCATTCAGG CTCGGCGCAA GCTGTCTTCG ATCCTGTTTT CGTAA
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Protein sequence | MVMSNSGNPY GGSYGGQMTA NAQFGAAPAA AAPASAGASP AGGLIKDTTT QGFAKDVLEE SRRQPVLVDF WAPWCGPCRQ LTPIIEKAVN EAKGKVKLVK MNIDEHPAIA GQLGIQSIPA VVAFVDGRPA DGFMGALPES QVKQFIDKLG GPDGGADQAA EIEAVLVEAK GLYDDGDFDG AAQLYAAVMQ ADPENAKAVA GIAECMLALN QHERVRQIVD GLPEELAKAP EIQAVAKKLE QIEEARKLGD PVALEQQLSL NPDDHEARLK LAKIRNVEGK REDAADHLLL IMKKDRTFDD DGARRQLVEF FEVWGPKDPA TIQARRKLSS ILFS
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