Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4232 |
Symbol | xth |
ID | 7386986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3558158 |
End bp | 3558961 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643652904 |
Product | exodeoxyribonuclease III |
Protein accession | YP_002551077 |
Protein GI | 222150120 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00320873 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTTT CCCTGACCAC CTGGAATATC AATTCGGTGC GGCTGCGCAT GCCGATTGTC GAGCATTTTC TCAAACTGCG TCAGCCGGAT ATTCTCTGCC TTCAGGAAAT CAAATGCCAG AACCATGAGT TTCCGTTGGA GGCGTTTCAG GCGCTGGGCT ATCCCTATGC TATTCTGCAT GGCCAGAAGG GCTATCATGG CGTTGCCACC GTCTCGAAAT TTCCTTTGAC CGAAGACCAC CGGCAGGATT TCTGCGGCGT CGGTGACAGC CGCCATATTT CGGCGATTTT TGAGTGGAAC GGGCGGCGTA TTCGCCTGCA TAATTTCTAT GTGCCCGCCG GAGGCGACGA GCCCAACCGG GACATCAATC CAAAATTCGG CCACAAGCTG GATTTCGTCG AGGAAATGAA GGCGCTGTCG GCCAGTGCCG AGCCAAATAC GTCGGCTATC CTGGTCGGCG ACCTGAATAT CGCGCCGCTG GAGCACGATG TCTGGTCGCA CAAGCAGTTG CTGAAGATCG TGTCCCATAC CCCGGTGGAA ACCGCAGGCC TGCTTGACGT GATTAATCGC GGTGGATGGG TGGACCTGAT GCGCCAGCTG GTCGATCCAT CGCAAAAACT CTATACGTGG TGGAGCTACC GGGCCAAGGA CTGGGACAGC GCCGACAAGG GCCGCCGCCT CGACCATATC TGGTCGTCAC CGGATCTGTT ACCGTCGCTG AAAACCATCG AGATTTTGCG CGAGGCACGC GGCTGGGAAA AGCCTTCTGA CCACGTGCCG GTGACGGTGC AGTTCGCGCT TTGA
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Protein sequence | MTFSLTTWNI NSVRLRMPIV EHFLKLRQPD ILCLQEIKCQ NHEFPLEAFQ ALGYPYAILH GQKGYHGVAT VSKFPLTEDH RQDFCGVGDS RHISAIFEWN GRRIRLHNFY VPAGGDEPNR DINPKFGHKL DFVEEMKALS ASAEPNTSAI LVGDLNIAPL EHDVWSHKQL LKIVSHTPVE TAGLLDVINR GGWVDLMRQL VDPSQKLYTW WSYRAKDWDS ADKGRRLDHI WSSPDLLPSL KTIEILREAR GWEKPSDHVP VTVQFAL
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