| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4223 |
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| Symbol | leuC |
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| ID | 7386980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3552573 |
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| End bp | 3553982 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652898 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_002551071 |
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| Protein GI | 222150114 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAC CCCGTACCCT CTACGACAAG ATTTTCGATG ACCATCTGGT GGATCGCCAG
GATGACGGCA CCTGTCTTCT CTATATCGAT CGCCACCTCG TGCACGAGGT GACAAGCCCG
CAGGCCTTTG AAGGTCTGCG CATGGCTGGC CGCAAGGTGC ATGCACCAAC CCGCACTCTG
GCCGTTGTTG ACCATAACGT ACCGACCACG CCGGACCGGG CCGAAGGCAT CAAGAACGAG
GAAAGCCGCA TCCAGGTCGA GGCCTTGGCC AAGAATGCCG CGGATTTCGG CGTCGAATAT
TATTCCGAAA AAGACAAGCG CCAGGGCATC GTGCATATCG TCGGCCCTGA ACAGGGCTTC
ACCCTGCCTG GCATGACCAT CGTCTGCGGC GACAGCCATA CCTCGACCCA CGGAGCCTTC
GGCGCCCTGG CGCATGGCAT CGGCACGTCG GAAGTGGAAC ATGTTCTGGC CACCCAGACC
TTGATCCAGA AGAAAGCCAA GAACATGCTG GTGCGTGTCG ATGGCAAGCT GCCCGCAGGT
GTGACCGCCA AGGACATCAT TCTTGCCATC ATCGGTGAAA TCGGCACCGC TGGCGGCACC
GGCCACGTCA TCGAATTTGC CGGTGAAGCT ATCGAGGCCC TGTCGATGGA AGGCCGCATG
ACCGTCTGCA ACATGACGAT CGAAGGCGGC GCCCGCGCTG GCCTGATTGC GCCTGACGAA
AAGACCTTCG AATATATCAA GGGCAAGCCC CGCGCGCCGA AGGGTGAAGA GCTGGAGATG
GCGCTTCAAT ACTGGAAGAC GCTGCATACC GATGAAGGCG CACATTTCGA CCGCACCGTC
GTGCTGGATG CCGCCAACCT GCCGCCCATC GTCTCCTGGG GTTCTTCGCC GGAAGATGTG
ATTTCGGTTC AGGGCGTCGT GCCGAACCCC GACGATATCG CTGACGAAAA CAAGCGGACG
TCGAAGTGGC GGGCGCTCGA CTATATGGGC CTGAAACCCG GCACCAAGAT CACCGATATC
ACCATCGACC GGGTGTTCAT CGGTTCCTGC ACCAATGGCC GCATCGAAGA CCTGCGCGCC
GCAGCAGCCG TGCTGAAGGA TCGCAAGGTG GCATCGACGG TTTCTGCCAT GGTGGTTCCG
GGGTCTGGCC TCGTCAAGGA ACAGGCAGAA GCCGAAGGTC TCGACAAAAT CTTCCTGGAT
GCCGGTTGCG AATGGCGTGA GCCGGGCTGT TCCATGTGCC TGGCGATGAA CGACGACCGC
CTGAAGCCGG AAGAACGCTG CGCCTCCACC TCGAACCGCA ATTTCGAAGG CCGCCAGGGC
TATAAGGGCC GCACCCACCT CGTGTCCCCC GCCATGGCCG CTGCCGCTGC CATTGCCGGC
CACTTCGTCG ATATCCGCGA GTGGAAGTGA
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| Protein sequence | MSAPRTLYDK IFDDHLVDRQ DDGTCLLYID RHLVHEVTSP QAFEGLRMAG RKVHAPTRTL
AVVDHNVPTT PDRAEGIKNE ESRIQVEALA KNAADFGVEY YSEKDKRQGI VHIVGPEQGF
TLPGMTIVCG DSHTSTHGAF GALAHGIGTS EVEHVLATQT LIQKKAKNML VRVDGKLPAG
VTAKDIILAI IGEIGTAGGT GHVIEFAGEA IEALSMEGRM TVCNMTIEGG ARAGLIAPDE
KTFEYIKGKP RAPKGEELEM ALQYWKTLHT DEGAHFDRTV VLDAANLPPI VSWGSSPEDV
ISVQGVVPNP DDIADENKRT SKWRALDYMG LKPGTKITDI TIDRVFIGSC TNGRIEDLRA
AAAVLKDRKV ASTVSAMVVP GSGLVKEQAE AEGLDKIFLD AGCEWREPGC SMCLAMNDDR
LKPEERCAST SNRNFEGRQG YKGRTHLVSP AMAAAAAIAG HFVDIREWK
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