Gene Avi_4102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4102 
Symbol 
ID7388898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3457150 
End bp3457422 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content54% 
IMG OID643652806 
Producttranscriptional regulator ArsR family 
Protein accessionYP_002550979 
Protein GI222150022 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00250446 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGTCCCATG AAAACCGGCT GTTGATTCTG TGTATTCTCA GCGAAGGGGA AAAGACGGTT 
GGCGAGCTGG AAGTGCTTCT GCAATTGCAG CAGGCCATTG TGTCACAGCA ACTGGCACGG
TTGCGGATGG ACAATCTGGT GGAAAGCCGC CGGTCCGGGC GCCAGATTTA TTATTCGATC
ACCAATCCGG CGGTGAAGGA ACTGGTATCG GTGCTGTACC AGATGTATTG TTCACCTGCG
GGCGAGGAGA CGACATTCGA CCTGCGTGAT TGA
 
Protein sequence
MSHENRLLIL CILSEGEKTV GELEVLLQLQ QAIVSQQLAR LRMDNLVESR RSGRQIYYSI 
TNPAVKELVS VLYQMYCSPA GEETTFDLRD