| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4097 |
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| Symbol | fdhA |
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| ID | 7388894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3451115 |
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| End bp | 3453994 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652802 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_002550975 |
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| Protein GI | 222150018 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCTGA TCCATGAAAT TGACTACGGC ACCCCGGCTT CGCTTTCCAC CGAGACGGTG
ACGCTGACCA TTGATGGTCG TGAGGTGACG GTGGCGGCAG GTACGTCGAT CATGCGGGCC
TCGATGGAGG CTGGCATTCA GGTGCCGAAG CTGTGCGCCA CCGACATGGT GGATGCCTTT
GGTTCCTGTC GGCTCTGTCT GGTGGAGGTC GAGGGCCGCA ATGGTACCCC GGCCTCCTGC
ACCACGCCCT GCGCGCCCGG TATCGTCGTT CACACCCAGA CGGAGCGGCT TAAAGCCATC
CGCAAGGGGG TGATGGAGCT TTATATCTCC GACCATCCCC TGGACTGTCT GACCTGTGCA
GCCAATGGCG ATTGCGAATT GCAGGACATG GCAGGGGCCG TGGGCCTGCG CGATGTTCGC
TACGGCTATG AGGGTGACAA CCACGTCAAG ACCCGGGCTG GTGAAGGGTT GAATGCCCGC
TACATGCCGA AGGACGAAAG CAATCCTTAT TTCACCTATG ATCCCTCCAA ATGCATCGTC
TGTTCGCGGT GTGTGCGGGC CTGCGAGGAA GTGCAGGGTA CGTTTGCGCT GACCATTGAG
GGGCGCGGCT TCGGTAGCCG GGTGTCGCCC GGCGCCCATG AGGCATTTCT GGAATCGGAA
TGCGTGTCCT GCGGGGCCTG CGTGCAGGCC TGTCCGACTG CGACACTGAC GGAAAAATCC
GTCATCGCCA TTGGCCAGCC GGAGCATTCG CTGGTGACGA CCTGCGCCTA TTGCGGCGTC
GGCTGTTCCT TCAAAGCGGA AATGCGCGGC GAAGAACTGG TGCGCATGGT GCCGTGGAAA
GACGGCAAGG CCAATCGCGG CCATTCCTGC GTCAAGGGCC GGTTTGCCTA TGGCTATGCC
AGCCACAAGG ATCGCATCCT CAATCCGATG GTGCGGGAGA AAATTACCGA TCCGTGGCGG
GAAGTGAGCT GGGAGGAGGC CTTTGCCCAT GTGGCCTCCG AGTTCAAGCG GTTGCAATAT
CAATATGGCC GCGATTCCAT CGGCGGCATT ACCTCCTCGC GCTGTACCAA TGAAGAAACC
TATCTGGTGC AGAAGCTGAT CCGCGCTGGC TTTGGCAATA ACAATGTCGA TACCTGCGCC
CGCGTCTGCC ATTCGCCGAC CGGTTATGGT CTCGGCCAAG CCTTCGGGAC GTCGGCGGGT
ACGCAGGATT TCGACAGTGT CGAGCATTCC GATGTGGTGC TCGTCATCGG TGCCAATCCG
ACCGATGGCC ATCCGGTGTT TGGTTCGCGG CTGAAAAAGC GGCTGCGGAA GGGCGCGAAA
CTGATCGTTA TCGATCCGCG CCGTATCGAT CTGGTTAAGA CGCCGCATGT CGAGGCGGCT
TTCCATTTGC CGCTGAAGCC CGGCACCAAT GTTGCCGTGC TGACGGCGCT GGCGCATGTG
ATCGTCACCG AGGGCCTCGC CAACGAAGCC TTTATCCGCG AGCGCTGCGA CTGGTCAGAA
TTTGAGGATT GGGCGGCTTT TGTGGCCGAT CCTCAGCATA GCCCGGAAGC AACTGAGGCG
TTTACAGGCG TACCTGCTGC TGATCTGCGC GGGGCGGCCA GGCTTTATGC CACCGGCGGC
AATGGGGCGA TCTATTACGG GTTGGGCGTA ACAGAGCATA GCCAGGGCTC GACCACTGTC
ATGGCGATTG CCAATCTGGC CATGGCGACC GGCAATATCG GCCGTCCGGG TGTCGGGGTG
AACCCGCTGC GTGGGCAGAA CAATGTGCAG GGGTCCTGCG ATATGGGGTC TTTCCCCCAT
GAACTGCCGG GCTATCGGCA TATTTCCGAC GATGCCACCC GCGAGACCTT CGAGAAACTC
TGGGGTGTGA CGCTGAACAA CGAGCCGGGC CTGCGTATTC CCAATATGCT AGATGCGGCG
GTGGAAGGCA CGTTCAAGGG GCTTTACGTC CAGGGCGAGG ATATTTTGCA ATCCGACCCG
GATACCAAGC ATGTTTCGGC AGGCTTGGCG GCGATGGAAT GCGTTGTTGT CCACGATCTG
TTTTTGAATG AAACCGCCAA TTACGCGCAT GTCTTCCTGC CGGGTTCGAC CTTCCTGGAA
AAGGACGGTA CGTTTACCAA TGCCGAGCGG CGCATCAACC GGGTGCGAAA GGTGATGAGC
CCGAAAAATG GTTATAGCGA CTGGGAAGTG ACCCAGAAAA TGGCTGAGGC CATGGGGCTA
GGCTGGAATT ACAGCCATCC GTCCCAGATC ATGGCGGAAA TCGCCGCGAC GACGCCAAGC
TTTGCCGGTG TTTCCTATGA GATGCTGGAG GAAAAGGGGT CTGTGCAATG GCCCTGCAAC
GAACAGCATC CAGACGGTTC GCCGATAATG CATGTCGATG GCTTCGTGCG CGGCAAGGGT
AAGTTTATCC GCACCGAATA TGTGGCGACG GACGAGCGCA CCGGCCCGCG CTTCCCGCTG
CTGCTGACCA CCGGGCGTAT TCTGTCGCAG TATAATGTCG GCGCGCAGAC GCGGCGCACC
GAAAACACCG TCTGGCATGG AGAAGACCGG CTGGAAATCC ATCCGCATGA TGCCGAACAG
CGCGGTATCA AGGAAGGAGA CTGGATCAAG CTGGCCAGCC GTTCTGGCGA CACGACGCTG
CGGGCACTGA TCACCGACCG CGTCGCGCCG GGCGTGGTCT ATACCACCTT CCATCACCCC
GATACGCAGG CGAATGTCAT CACCACGGAT TATTCCGATT GGGCGACCAA TTGCCCCGAA
TATAAGGTGA CCGCAGTGCA GGTTTCGCCC TCGAACGGTC CGACCGAATG GCAGCGGGAC
TATGATGAAC TGTCGCGCCA GTCCCGCCGG ATTTCCGGCA AGCTGGAAGC GGCGGAATAG
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| Protein sequence | MSLIHEIDYG TPASLSTETV TLTIDGREVT VAAGTSIMRA SMEAGIQVPK LCATDMVDAF
GSCRLCLVEV EGRNGTPASC TTPCAPGIVV HTQTERLKAI RKGVMELYIS DHPLDCLTCA
ANGDCELQDM AGAVGLRDVR YGYEGDNHVK TRAGEGLNAR YMPKDESNPY FTYDPSKCIV
CSRCVRACEE VQGTFALTIE GRGFGSRVSP GAHEAFLESE CVSCGACVQA CPTATLTEKS
VIAIGQPEHS LVTTCAYCGV GCSFKAEMRG EELVRMVPWK DGKANRGHSC VKGRFAYGYA
SHKDRILNPM VREKITDPWR EVSWEEAFAH VASEFKRLQY QYGRDSIGGI TSSRCTNEET
YLVQKLIRAG FGNNNVDTCA RVCHSPTGYG LGQAFGTSAG TQDFDSVEHS DVVLVIGANP
TDGHPVFGSR LKKRLRKGAK LIVIDPRRID LVKTPHVEAA FHLPLKPGTN VAVLTALAHV
IVTEGLANEA FIRERCDWSE FEDWAAFVAD PQHSPEATEA FTGVPAADLR GAARLYATGG
NGAIYYGLGV TEHSQGSTTV MAIANLAMAT GNIGRPGVGV NPLRGQNNVQ GSCDMGSFPH
ELPGYRHISD DATRETFEKL WGVTLNNEPG LRIPNMLDAA VEGTFKGLYV QGEDILQSDP
DTKHVSAGLA AMECVVVHDL FLNETANYAH VFLPGSTFLE KDGTFTNAER RINRVRKVMS
PKNGYSDWEV TQKMAEAMGL GWNYSHPSQI MAEIAATTPS FAGVSYEMLE EKGSVQWPCN
EQHPDGSPIM HVDGFVRGKG KFIRTEYVAT DERTGPRFPL LLTTGRILSQ YNVGAQTRRT
ENTVWHGEDR LEIHPHDAEQ RGIKEGDWIK LASRSGDTTL RALITDRVAP GVVYTTFHHP
DTQANVITTD YSDWATNCPE YKVTAVQVSP SNGPTEWQRD YDELSRQSRR ISGKLEAAE
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