Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4043 |
Symbol | |
ID | 7388853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 3403108 |
End bp | 3403740 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643652760 |
Product | hypothetical protein |
Protein accession | YP_002550934 |
Protein GI | 222149977 |
COG category | [S] Function unknown |
COG ID | [COG1738] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00697] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGATCA CACGGCACAT CTTCGTCTAC AGCCTACTCA TGACCCTGGT TGTGGTCGCC TCCAACATCC TCGTGCAGTT TCCGCTGTCG GGGCAATTGG CGGGCGTGCA GCTCGGCGAC CTCTTGACCT ATGGTGCCTT CACCTATCCG GTCGCCTTTC TGGTCACGGA TCTCACCAAT CGCCAGTTCG GCCCGTCCAC GGCCCGCAAA GTGGTGTTTG TGGGCTTTCT GGTGGGCGTG GCGCTATCCT TCGTCACCGG GCAGCCACGC ATCGCCATTG CCTCGGGCAC TGCCTATCTG GTCGGGCAAT TGCTTGATAT CAGCGTCTTC AACCGGCTGC GCCAGCAGGA CTGGTGGAAA GCACCGCTGG CCGGTTCACT GTTCGGCTCG GTACTCGATA CGGTGATTTT CTTCTCGCTG TCCTTTGCGC CGGTCTTTGG CTTCATCGGC CCGAATGATG ATTTTGCTAT CAGCTCAGCG CCGTTGCTTG GCGCGTTTTC CCCTGAAATC CCGCGCTGGA TCTCCTGGGC CATCGGTGAT TTTACCGTGA AAATGCTGGT CGGCCTGATC ATGCTTTTGC CCTATGGGGC ATTGATGAAC AGGCTGAAGC CCTACCAAGT TGCGCGGGCT TGA
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Protein sequence | MRITRHIFVY SLLMTLVVVA SNILVQFPLS GQLAGVQLGD LLTYGAFTYP VAFLVTDLTN RQFGPSTARK VVFVGFLVGV ALSFVTGQPR IAIASGTAYL VGQLLDISVF NRLRQQDWWK APLAGSLFGS VLDTVIFFSL SFAPVFGFIG PNDDFAISSA PLLGAFSPEI PRWISWAIGD FTVKMLVGLI MLLPYGALMN RLKPYQVARA
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