Gene Avi_4043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4043 
Symbol 
ID7388853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3403108 
End bp3403740 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content59% 
IMG OID643652760 
Producthypothetical protein 
Protein accessionYP_002550934 
Protein GI222149977 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATCA CACGGCACAT CTTCGTCTAC AGCCTACTCA TGACCCTGGT TGTGGTCGCC 
TCCAACATCC TCGTGCAGTT TCCGCTGTCG GGGCAATTGG CGGGCGTGCA GCTCGGCGAC
CTCTTGACCT ATGGTGCCTT CACCTATCCG GTCGCCTTTC TGGTCACGGA TCTCACCAAT
CGCCAGTTCG GCCCGTCCAC GGCCCGCAAA GTGGTGTTTG TGGGCTTTCT GGTGGGCGTG
GCGCTATCCT TCGTCACCGG GCAGCCACGC ATCGCCATTG CCTCGGGCAC TGCCTATCTG
GTCGGGCAAT TGCTTGATAT CAGCGTCTTC AACCGGCTGC GCCAGCAGGA CTGGTGGAAA
GCACCGCTGG CCGGTTCACT GTTCGGCTCG GTACTCGATA CGGTGATTTT CTTCTCGCTG
TCCTTTGCGC CGGTCTTTGG CTTCATCGGC CCGAATGATG ATTTTGCTAT CAGCTCAGCG
CCGTTGCTTG GCGCGTTTTC CCCTGAAATC CCGCGCTGGA TCTCCTGGGC CATCGGTGAT
TTTACCGTGA AAATGCTGGT CGGCCTGATC ATGCTTTTGC CCTATGGGGC ATTGATGAAC
AGGCTGAAGC CCTACCAAGT TGCGCGGGCT TGA
 
Protein sequence
MRITRHIFVY SLLMTLVVVA SNILVQFPLS GQLAGVQLGD LLTYGAFTYP VAFLVTDLTN 
RQFGPSTARK VVFVGFLVGV ALSFVTGQPR IAIASGTAYL VGQLLDISVF NRLRQQDWWK
APLAGSLFGS VLDTVIFFSL SFAPVFGFIG PNDDFAISSA PLLGAFSPEI PRWISWAIGD
FTVKMLVGLI MLLPYGALMN RLKPYQVARA