Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4036 |
Symbol | gloB |
ID | 7388847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 3398836 |
End bp | 3399606 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643652754 |
Product | glyoxalase II |
Protein accession | YP_002550928 |
Protein GI | 222149971 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCC CGGATATCGA AATCTTCCCG TGTCGCACCG ACAATTACGG TGTGCTGGTC CATTGCCCAG AAACCGGCTT GACCGCGTCC ATCGATGCAC CGGAGGAAGG CCCGATCGTG GCCGCTGCCG AAAAACGCGG CTGGCAGATC AGCCATATCT TCACCACCCA TCACCATAAT GATCATGTCG AAGCCAATCT GGCGCTGAAG CAACGATATG GCTGTGAGAT CATCGGGCCG GTCAACGAGG CTGTCGCCAT ACCCGGACTG GATCGGTCCG CCTATGATGG GGAAGAGTTT TTATTCGGAC CGCACCGGGT CCAGGTGATC GAAACGCCGG GCCACACGGC AGGCCATGTC TGCTATCATT TTCCAGACGC CAAACTGCTG TTTGCCGCCG ATACGCTGTT TGCGCTCGGC TGCGGACGGC TGTTCGAACG CCCCGCTGCC GACATGTGGC ATTCCCTGCA AAAGCTGGCC GTGCTGCCGG ATGAAACCGC CATCTATTTC GGCCATGAAT ACACGCTTGC CAATGCCCGT TTCGCCCTGA CCATCGACCC TGACAATGAG CGGCTGCAAG CCCGTGCCCG CGACATCGAG GCGATGCGGG CGCAAGGGCA GTTCACCATT CCCACCACCA TGTCTCTGGA AAAGGAAACC AATCCCTTCC TGCGGGTGGC CGATCCAAAA ATCCGCCGCA ACCTGGTGAT GGAAAGCAAG AGCAATGAAG AGGTGTTTGC CGAAATCCGC AAGCGCAAGG ACAATTTCTG A
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Protein sequence | MKSPDIEIFP CRTDNYGVLV HCPETGLTAS IDAPEEGPIV AAAEKRGWQI SHIFTTHHHN DHVEANLALK QRYGCEIIGP VNEAVAIPGL DRSAYDGEEF LFGPHRVQVI ETPGHTAGHV CYHFPDAKLL FAADTLFALG CGRLFERPAA DMWHSLQKLA VLPDETAIYF GHEYTLANAR FALTIDPDNE RLQARARDIE AMRAQGQFTI PTTMSLEKET NPFLRVADPK IRRNLVMESK SNEEVFAEIR KRKDNF
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