Gene Avi_4024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4024 
Symbolhpt 
ID7387352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3389138 
End bp3389686 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content54% 
IMG OID643652743 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_002550917 
Protein GI222149960 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTCG TTCGCGGAAA AAATATCGAA CCTTTGTTCA CAGCCGAACA GATCGCCGCC 
CGCAATATCG AGATCGCCAA GGCGATTGTC GATGGTCCTT CCGAGGATCT TCTGGTGATT
TCGATCTTGA AAGGCTCGTT TATTTTCGCC GCTGATCTGA TCCGGGCGCT GCATCATGTC
GGCATTGCGC CGGAGGTGGA ATTTATCACC TTGTCCAGCT ACGGCACCGG CACTGTGTCG
CAGGGGGTCA AGATCCTCAA GGATATCGAC AGCGATGTCC GTGGCCGCAA TGTTTTGCTG
ATCGACGACA TCCTGGAATC GGGACGAACC CTGCTGTTTG CCCGCACGTT GATGTATGAG
CGGGGTGCTG CCAATGTTAG CATTGCCGTG CTGCTCGACA AGAAGGTCAA GCGCAAGGAA
GTGTGCGAGG CCGATTATGT CGGTTTCGAA TGCCCGGATT ATTTTGTCGT CGGCTATGGC
ATGGATGTCG CTCACGCTTT CCGCGAATTG CCTTTTGTCG GTGTTGTTAC CGGCGATGCA
GCGTCATAA
 
Protein sequence
MPVVRGKNIE PLFTAEQIAA RNIEIAKAIV DGPSEDLLVI SILKGSFIFA ADLIRALHHV 
GIAPEVEFIT LSSYGTGTVS QGVKILKDID SDVRGRNVLL IDDILESGRT LLFARTLMYE
RGAANVSIAV LLDKKVKRKE VCEADYVGFE CPDYFVVGYG MDVAHAFREL PFVGVVTGDA
AS