Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4024 |
Symbol | hpt |
ID | 7387352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3389138 |
End bp | 3389686 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643652743 |
Product | hypoxanthine phosphoribosyltransferase |
Protein accession | YP_002550917 |
Protein GI | 222149960 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0634] Hypoxanthine-guanine phosphoribosyltransferase |
TIGRFAM ID | [TIGR01203] hypoxanthine phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGTCG TTCGCGGAAA AAATATCGAA CCTTTGTTCA CAGCCGAACA GATCGCCGCC CGCAATATCG AGATCGCCAA GGCGATTGTC GATGGTCCTT CCGAGGATCT TCTGGTGATT TCGATCTTGA AAGGCTCGTT TATTTTCGCC GCTGATCTGA TCCGGGCGCT GCATCATGTC GGCATTGCGC CGGAGGTGGA ATTTATCACC TTGTCCAGCT ACGGCACCGG CACTGTGTCG CAGGGGGTCA AGATCCTCAA GGATATCGAC AGCGATGTCC GTGGCCGCAA TGTTTTGCTG ATCGACGACA TCCTGGAATC GGGACGAACC CTGCTGTTTG CCCGCACGTT GATGTATGAG CGGGGTGCTG CCAATGTTAG CATTGCCGTG CTGCTCGACA AGAAGGTCAA GCGCAAGGAA GTGTGCGAGG CCGATTATGT CGGTTTCGAA TGCCCGGATT ATTTTGTCGT CGGCTATGGC ATGGATGTCG CTCACGCTTT CCGCGAATTG CCTTTTGTCG GTGTTGTTAC CGGCGATGCA GCGTCATAA
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Protein sequence | MPVVRGKNIE PLFTAEQIAA RNIEIAKAIV DGPSEDLLVI SILKGSFIFA ADLIRALHHV GIAPEVEFIT LSSYGTGTVS QGVKILKDID SDVRGRNVLL IDDILESGRT LLFARTLMYE RGAANVSIAV LLDKKVKRKE VCEADYVGFE CPDYFVVGYG MDVAHAFREL PFVGVVTGDA AS
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