| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3981 |
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| Symbol | ppiD |
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| ID | 7387321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3350170 |
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| End bp | 3351045 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643652711 |
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| Product | peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_002550886 |
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| Protein GI | 222149929 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGTT CTCACAAACT CGTCCTGGCG GCCTGTGCCG CCCTTGTGGC GCTGTCTTCC
TACGCCCATG CCGACGATGC TGTCGTCGCC AAGGTCGGCA CTCTGGAAAT CCACCAGTCC
GAGCTGGATC TGGCCATTGC CAACCTCGAT CCCCAGTTTG CCCAGATGCC GGATGACCAG
AAAAAGGTTG CGGCTCTGTC CGGTGCCATC GATGTCAAGC TGCTTGCCGG CAGCGCCATC
GGCGAAAAAA TGCAGGACGA TCCGGCCTAC AAGCAGCGCA TGGCTTTCAT TGCCGACCGC
GAATTGCACA ATGCCTTTTT CAAGAAGCAT GTTGTTGATG TGACGACCGA TGAGGAAGTC
AAGGCGCGCT ATGAGAAGGA AATTGCCGCT CTGCCGAAGG AGCAGGAAAT TCACGCCCGT
CACATTCTGG TGAAGACCGA GGATGAAGCC AAGGATGTGA TCAAGCAACT GGACGCTGGC
AAGGATTTTG CTGAGCTTGC CAAGGAAAAA TCGACCGATT CCAGCGGATC GGACGGCGGT
GATCTCGGTT TCTTCTCCAA GGGCCGTATG GTGCCTGAAT TCGAAGAAGC GGCCTTTGCC
CTGAAGCCCG GCACCTATAC CAAGACCCCG GTCAAGAGCC AGTTCGGCTT CCACGTCATC
AAGGTCGAAG AGATCCGTGA CGCGGCTCCG CCGAAATTCG AAGATGTGCA GCAGCAGGTT
CGCCAGCTGG TGATGCGTGA CAAGTATCTG GCCCTGCTGG AAAAGGCCAA GACCTCTGAA
AAGGTCGAGA TCGTCGATCC GGCTCTGAAG AAGGGCTATG AGGACATCAG CAAGCAGCAA
GCCGATCCGG ACGCTGCCGC CGCGCCGAAG CCATAA
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| Protein sequence | MLRSHKLVLA ACAALVALSS YAHADDAVVA KVGTLEIHQS ELDLAIANLD PQFAQMPDDQ
KKVAALSGAI DVKLLAGSAI GEKMQDDPAY KQRMAFIADR ELHNAFFKKH VVDVTTDEEV
KARYEKEIAA LPKEQEIHAR HILVKTEDEA KDVIKQLDAG KDFAELAKEK STDSSGSDGG
DLGFFSKGRM VPEFEEAAFA LKPGTYTKTP VKSQFGFHVI KVEEIRDAAP PKFEDVQQQV
RQLVMRDKYL ALLEKAKTSE KVEIVDPALK KGYEDISKQQ ADPDAAAAPK P
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