| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3956 |
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| Symbol | ptsI |
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| ID | 7387304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3332016 |
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| End bp | 3334280 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652694 |
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| Product | phosphoenolpyruvate-protein phosphotransferase |
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| Protein accession | YP_002550869 |
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| Protein GI | 222149912 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGACC TTTCCGCAGG TCCGCGCGTC CTCCTCAAGC GGCTTCGCGA ATTGATGGCG
GAGCCCCTTG AGCCTCAGGA GCGTCTTGAC CGTATCACTC GCCAGATCGC GAGCAATATG
GTTGCCGAAG TTTGCTCCGT TTATGTTTTG CGTTCCGATG GTGTGCTGGA GCTTTACGCC
ACCGAAGGTC TCAATCCCGA CGCGGTGCAT CTGGCCCAGC TGAAAATGGG GCAAGGTCTG
GTCGGTACCA TCGCGGCATC CGCCCAACCA CTCAATCTTT CCGATGCGCA GGCGCATCCC
GCTTTCCGCT ATCTCCCTGA AACTGGTGAG GAAATTTATC ATTCCTTCCT CGGTGTGCCG
ATTTTGCGGG CTGGCCGCAG TCTTGGCGTT CTTGTCGTCC AGAACAAGGC GCAACGGAAT
TATCGGGAAG ACGAGCTTGA AGCGCTTGAA ACCACGGCCA TGGTGCTGGC CGAAATGATT
GCCACTGGCG ATTTGAAGAA AATTACCCGG CCGGGCCTTG AATTGGACCT GACGCGGGCC
GTGACCATCG ATGGCGACAG CTATAGCGAG GGCATCGGTC TTGGCCATGT CGTGCTGCAC
GAACCGCGCA TCGTAGTCAC CAATCTGTTG AACGAGGATA CCGAGACCGA GCTGAAGCGG
ATGGCCGAAT CGCTCGGCTC CCTGCGCATC TCCATCGATG ACATGCTGTC GCGCCGCGAA
GTGGCAATGG AAGGCGAGCA TCGTGAGGTG CTGGAAACCT ACCGGATGTT TGCCCATGAC
CAGGGCTGGG TGCGGCGCAT GGAAGAGGCG ATCCGCAACG GCCTGACGGC GGAAGCGGCG
GTCGAAAAGG TCCAGAGCGA TACAAAGGCG CGGATGATGC GCCTGACCGA TCCCTATATG
CGCGAGCGCA TGCATGATTT TGACGATCTG GCCAACCGGT TGCTGCGGCA GCTGACCGGA
TTTTCCGGCA GTAGCGCCGA AGGATTTCCC TCGGATGCGG TGATTTTCGC CCGTGCCATG
GGCGCTGCCG AATTGCTCGA TTATCCGCGC CAGAACATTC GCGGTCTGGT ACTCGAAGAC
GGCGCTGTCA CCAGCCATGT GGTGATTGTT GCCCGCGCCA TGGGCATTGC CGTGGTCGGG
CAGGCAGCCG GTGCTGTGGC GCTGGCTGAA AACGGTGATG CCGTTATTAT CGATGGCGAT
GACGGTAAGG TGCATGTGCG CCCGATGGTC GATCTGCAGA CTGCCTATGA GGAAAAGGTC
AAGCTGCGTG CTCGCCGCCA GGAACAGTTC AAGGCGCTGC GCGATGTTGA GCCGCTCAGC
AAGGACGGAC AGCGAATCAA ATTGCAGATG AATGCCGGTT TGATGGTCGA TCTGCCGCAA
TTGGCCGAAT CGGGGGCCGA GGGCATTGGC CTGTTCCGCA CCGAGTTGCA ATTTATGATC
GCTTCGACCA TGCCCAAGGC CGATGAGCAG GAAGCGCTCT ATCGCAATGT GCTGAAACAG
GCGAAGGGTC GGCCCGTCAC CTTCCGCACG CTGGATATCG GCGGCGATAA GGTGCTGCCC
TATTTCCGCA GCCATGAGGA AGAAAACCCA GCTCTCGGCT GGCGCGCCAT CCGGCTGTCG
CTGGACCGGC CCGGCCTGTT GCGCACCCAG ATGCGGGCGC TGTTGAAGGC CGCGACCGGG
GGTGAGCTGA AGATGATGCT GCCGATGGTC ACGGAAGTGT CGGAAATCCG CGCTGCCCGC
GAATTGCTGC AGAAGGAAGT GCAGCATATT TCCAAATTCG GCCATGGCCT GCCAAAGCGG
CTGCAATTCG GCGTGATGCT GGAGGTTCCT GCCCTGATGT GGCAACTTGA CGAGTTGATG
CAGGAAGTGG ATTTCGTCTC GGTTGGCTCC AATGACCTGT TCCAGTTTTC CATGGCGGTC
GACCGGGGCA ATGCCCGGGT GTCCGACCGG TTCGACACTC TGGGCCGGCC TTTCCTGCGC
ATTCTGCGCG ATATTGTCCG CGCCGCCGAT CGGCACGATA CGCCGGTGAC GCTGTGCGGC
GAGATGGCGG GAAAGCCGTT GTCATCCATG GCGCTGTTTG CTATCGGCTT CCGTTCGGTG
TCGATGTCGC CGACGGCCAT CGGTCCGATC AAGGCCATGC TGTTGCAATT GGATATCGGC
AGGCTTTCCG CCGAGCTGAA TGCGTTGCTG GACGACAACA GGCCAAGTGA GCCGATCCGG
GCTTTCCTGA CACGGTTTGC CGAACAGAAC GGCGTTCCGG TCTGA
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| Protein sequence | MRDLSAGPRV LLKRLRELMA EPLEPQERLD RITRQIASNM VAEVCSVYVL RSDGVLELYA
TEGLNPDAVH LAQLKMGQGL VGTIAASAQP LNLSDAQAHP AFRYLPETGE EIYHSFLGVP
ILRAGRSLGV LVVQNKAQRN YREDELEALE TTAMVLAEMI ATGDLKKITR PGLELDLTRA
VTIDGDSYSE GIGLGHVVLH EPRIVVTNLL NEDTETELKR MAESLGSLRI SIDDMLSRRE
VAMEGEHREV LETYRMFAHD QGWVRRMEEA IRNGLTAEAA VEKVQSDTKA RMMRLTDPYM
RERMHDFDDL ANRLLRQLTG FSGSSAEGFP SDAVIFARAM GAAELLDYPR QNIRGLVLED
GAVTSHVVIV ARAMGIAVVG QAAGAVALAE NGDAVIIDGD DGKVHVRPMV DLQTAYEEKV
KLRARRQEQF KALRDVEPLS KDGQRIKLQM NAGLMVDLPQ LAESGAEGIG LFRTELQFMI
ASTMPKADEQ EALYRNVLKQ AKGRPVTFRT LDIGGDKVLP YFRSHEEENP ALGWRAIRLS
LDRPGLLRTQ MRALLKAATG GELKMMLPMV TEVSEIRAAR ELLQKEVQHI SKFGHGLPKR
LQFGVMLEVP ALMWQLDELM QEVDFVSVGS NDLFQFSMAV DRGNARVSDR FDTLGRPFLR
ILRDIVRAAD RHDTPVTLCG EMAGKPLSSM ALFAIGFRSV SMSPTAIGPI KAMLLQLDIG
RLSAELNALL DDNRPSEPIR AFLTRFAEQN GVPV
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