| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3939 |
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| Symbol | |
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| ID | 7387292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3304162 |
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| End bp | 3305679 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652676 |
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| Product | UDP-glucose/GDP-mannose dehydrogenase |
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| Protein accession | YP_002550857 |
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| Protein GI | 222149900 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.809757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCGCAG TCCGCAGGCT GTTGCAAGAG GCAGATGCAG ATTTCTCGCC ACCCATCACA
GCCGATCAAC ATTGCCCGAC AAGATCATCG CACACCCTTG ACATCCCATC ATGCGAACCG
CAACTGAAGC CGGTATTGAA ATCGCCTGCG GAGCTTTATC CCACCATGTC CCATCATCCC
GTTGCCGCCG AATTGCTGTC CGCCATCCAG TCCCGCCGCG CCAAGGCAGC GGTGATCGGC
CTCGGCTATG TCGGCCTGCC GCTGGCCATC AGTATTGCCA AGGCCGGATT CACGGTGATG
GGCTTTGATA TCGATGCCGC CAAGATCGAC GCAATCGAGG CCGGAACAAG CTATATTGAG
GCCGTACCAG AACATATTCT GCGCGAAGAA TGCGCGGCGG GCCGCTTTTC CGCCACCTCG
GATTTCCTGG CGCTGGCCGA TTATGACGTG ATCGCCATTT GCGTACCGAC GCCACTGACC
AAGAACCGCG ATCCAGATCT ATCCTATGTG GAAAACACCT GCCGCCAGAT TGCCAAGTCG
CTCAGGCCCG GCCAGCTGAT CGTGCTGGAA TCCACCACCT ATCCCGGCAC CACGCAAGAA
GTGGTGAAGC CGATCCTCGA ACATTCGGAA CTGCGGGCCG GAGAGCATTT CTTCCTCGGT
TTTTCCCCAG AACGCGAAGA TCCCGGCAAT CGTGAGTTTG AAACCTCGAC CATTCCAAAG
ATCATCGCCG GTGATGGCCC CGACGCTTCA GCCTTGATGG CGGCGTTTTA TGGTGCCGTG
GTCAAAACCG TGGTGCCGGT TTCCTCAACG GCGACGGCGG AAGCCGTCAA GCTGACCGAA
AACATCTTCC GCGCCGTCAA CATCGCCTTG GTCAATGAGC TGAAGCTGGT TTATGACGCC
ATGGGCATCG ATGTCTGGGA AGTGATCGAC GCCGCCAAGA CCAAGCCGTT CGGCTATATG
CCGTTTTACC CCGGCCCCGG CCTCGGCGGC CATTGCATTC CCATCGATCC GTTTTACCTG
ACCTGGAAAT CGCGCCAATA TGACCAGCCG ACACGGTTCA TCGAGCTGGC GGGCGAGATC
AACACGTCCA TGCCGCATCA CGTCGTCTCC AGGCTGGCCG AAGCACTGGA CCGCAAAGCA
GGAAAGGCGC TGAGCCGGTC GCGCGTGCTG ATCCTGGGTC TGGCCTACAA GAAAAACGTC
CCCGACATCA GGGAGAGCCC GTCGCTGCGG CTGATGGAGC TTATTCTGGA GCGCGGCGCC
GAAGTCGCCT ATTTCGACCC CTTCCTGCCC GAAATTCCGA AAACCCGCGA ATATAGCCAT
CTGAAAGGCC GCCGCAGCAT CGCCTGGAAC CAGGAAAACC TCGCCGCCTT CGATGCCGTG
CTGATCGCCA CCGACCATGA CACCGTCGAT TACCAGCAAC TGGCCGATTG GTGTCCGCTG
ATCGTTGATA CCCGCAACGC CCTTGCCCGC CGCAACATTG CCGATCAGGC AGCGGGCCAC
ACGATTGTGA AAGCGTGA
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| Protein sequence | MCAVRRLLQE ADADFSPPIT ADQHCPTRSS HTLDIPSCEP QLKPVLKSPA ELYPTMSHHP
VAAELLSAIQ SRRAKAAVIG LGYVGLPLAI SIAKAGFTVM GFDIDAAKID AIEAGTSYIE
AVPEHILREE CAAGRFSATS DFLALADYDV IAICVPTPLT KNRDPDLSYV ENTCRQIAKS
LRPGQLIVLE STTYPGTTQE VVKPILEHSE LRAGEHFFLG FSPEREDPGN REFETSTIPK
IIAGDGPDAS ALMAAFYGAV VKTVVPVSST ATAEAVKLTE NIFRAVNIAL VNELKLVYDA
MGIDVWEVID AAKTKPFGYM PFYPGPGLGG HCIPIDPFYL TWKSRQYDQP TRFIELAGEI
NTSMPHHVVS RLAEALDRKA GKALSRSRVL ILGLAYKKNV PDIRESPSLR LMELILERGA
EVAYFDPFLP EIPKTREYSH LKGRRSIAWN QENLAAFDAV LIATDHDTVD YQQLADWCPL
IVDTRNALAR RNIADQAAGH TIVKA
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