| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3915 |
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| Symbol | |
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| ID | 7387273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3275179 |
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| End bp | 3275826 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652657 |
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| Product | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase |
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| Protein accession | YP_002550838 |
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| Protein GI | 222149881 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
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| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0068917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCACCA CCCATACCCC ATGGCCGCAG TTGAAGCGCG AACTCGTCGC CATCCTGCGC
GGCATCGGTC CTGAGGACAT CGAAAGTGTT GTCGATGTGC TTCTGGAACA GGGCTTCGAG
GCCATCGAAG TGCCGTTGAA TTCGCCCGAT CCGTTCATTT CCATTGAAAA GGCCCGCAAA
CGTGCGCCTG ATGGTGTGCT GATCGGCGCG GGAACCGTAC TGGATGCCGG TTCGGTCGAG
CAATTGCACA GTGTTGGCGG CAACCTTCTG GTGACACCGA ACACCGACCC GGCAGTCATT
GGCCAGGCCG CCCGGCTGGG CATGGTCTCC ATGCCCGGCG CCTTTACGCC GACAGAAGCG
CTGGCCGCCA TCAAGGCCGG TGCCTCGGCG ATCAAATTCT TCCCCGCCAG CGTGCTGGGA
CCAAGCGGCA TCAATGCCAT CAAGGCCATT CTGCCCGCCA ATTTCCCAAT CGGCGCCGTC
GGCGGCGTTG GCGAAAACAA TTTCGGCGAC TATCTGAAGG CGGGCGTCCG CGCCTTCGGC
ATCGGCACCA GCCTCTACAA GCCCGGCGAC AAGGCCGATG TGGTCAAAGA ACGCGCCGCA
ACGCTGGTCG CTGCCTATGA TGCCGCCGTT GCTGCCCATA AGGCATAG
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| Protein sequence | MTTTHTPWPQ LKRELVAILR GIGPEDIESV VDVLLEQGFE AIEVPLNSPD PFISIEKARK
RAPDGVLIGA GTVLDAGSVE QLHSVGGNLL VTPNTDPAVI GQAARLGMVS MPGAFTPTEA
LAAIKAGASA IKFFPASVLG PSGINAIKAI LPANFPIGAV GGVGENNFGD YLKAGVRAFG
IGTSLYKPGD KADVVKERAA TLVAAYDAAV AAHKA
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