Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3879 |
Symbol | |
ID | 7388559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3236274 |
End bp | 3237326 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643652626 |
Product | ABC transporter |
Protein accession | YP_002550807 |
Protein GI | 222149850 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATGG TCATCTATGC CTTCAGCCTG GCGATCTATA CCCAGGCGAC CGGTCTTTCC CACGATCTGC GCAATGCGAC GCTGGCCGTG GTGGACCGGG ACATGTCGCA ATTGTCGTCT TCCATTCTCG ACGGATTGAT GCCGCCGCGC TTTCAAAAGC CGGTGGCAAT CGCGCCCCAG GATATCGACC GCGCTATGGA TCAGGCGCGC TACACCTTTG TGCTGGATAT TCCCGAACGG TTCGAGGCTG ATGTTTTGGC CGGGCGTAGC CCCTCGGTGC AGTTGCTGAT TGACGCGACC GCGTTGATGC AGGCGGGGGT GGGCTCCAGC ACCATCCAGC AGATCGTCAG CCAGCAGGTC GGGCTTTATG CCCAGCGTGT CGGCGTCTCA AGCAGTCAGG CGGTAACGGT GGAAACACGG CTCGCCTTCA ATCAATCGCT GAATTCGGAG TGGTTTTCCG GCACGATGGC GCTGATCAAC AATATTACCA TGCTGGCCAT CCTGCTGGCG GGCGCCGCTT TGGTACGCGA ACGGGAACAT GGGACGCTGG AACATTTGTT GGTCATGCCG GTCAGGCCTG TCGAAATCAT GGTCAGCAAG CTTGCCGCCA ATGGTCTGGT TATTCTGGTC ATGACGCTGT TTGCCATCGT CACCGTGTTG GTCAAGGTGC TCGGCATGCA CATTACCGGC TCACTGACGC TCTATATGGC GGGCGTGGCG CTCTACCTGT TCTTCGTCAC CTCGTTCGGG CTGTTTTTAG GGACGCTGGC CCGCAGCATG CCGCAACTGG CGCTGCTGTT CATCCTCACC GCTTTGCCGA TGAATATCCT GTCAGGCGGG TTCACCCCGC TGGAAAGCCA GCCGCAATGG CTGCAAAACG CCATGCAGGT CTCACCTTCG ACCCATTTCG TCGCCTTTTC ACAGGCCATT CTCTATCGCG GCGCGGGCTT CGATGTGGTC TGGCCGCAAT TTACCGCGAC GCTTGGCATC GGGCTGATAT TTTTCCTGTT CAGTCTCAGC CGGTTCCGGA CGTTCATCGC CGCGCAGCAG TGA
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Protein sequence | MAMVIYAFSL AIYTQATGLS HDLRNATLAV VDRDMSQLSS SILDGLMPPR FQKPVAIAPQ DIDRAMDQAR YTFVLDIPER FEADVLAGRS PSVQLLIDAT ALMQAGVGSS TIQQIVSQQV GLYAQRVGVS SSQAVTVETR LAFNQSLNSE WFSGTMALIN NITMLAILLA GAALVREREH GTLEHLLVMP VRPVEIMVSK LAANGLVILV MTLFAIVTVL VKVLGMHITG SLTLYMAGVA LYLFFVTSFG LFLGTLARSM PQLALLFILT ALPMNILSGG FTPLESQPQW LQNAMQVSPS THFVAFSQAI LYRGAGFDVV WPQFTATLGI GLIFFLFSLS RFRTFIAAQQ
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