| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3871 |
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| Symbol | |
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| ID | 7388553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3227049 |
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| End bp | 3228902 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652620 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002550801 |
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| Protein GI | 222149844 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAG ATCTCACCAC TCAGGGCGCA ATTCAGGGCG GGCATGTCCA GCCAGTTCTG
TCCGTGCGCA ATCTGACCAC CTCGTTTCGG ATCGGCGACC AGTGGTCTTC CGTGGTGCGC
AACATGAGCT TCGATGTCGC ACCGCGTGAG ACGGTCGCCA TTGTCGGCGA ATCCGGTTCG
GGCAAGAGTG TGACATCCCT GTCGATCATG CAATTGCTGC CGAAGAATTT CAGCCGGATC
GAGGGCAGCA TCAAGCTGAA CGGTCGTGAA TTGCTGACGC TGGCACCAGA AGAGATGCGC
CGGGTGCGCG GCAATGATAT TTCGATGATT TTCCAGGAGC CGATGACCAG CCTCAACCCG
ATTTTCCCGA TCGGCAAGCA GATCGCCGAG GCCATTCTAT GCCACCGCGA TATTTCCAGG
GCAGAGGCGA AATCCGAAGT GATCCGGCTG TTGGAAAAGG TCCGCATTCC CAATGCCAAA
AGTCGGTTCG ATGAATTCCC TCACCAGTTT TCCGGCGGCA TGCGCCAGCG GGTGATGATC
GCCATGGCAC TGGCCACCAA GCCGAAACTG CTGATCGCCG ACGAGCCGAC CACGGCGCTG
GATGTGACCA TCCAGGGCCA GATCCTCGAC CTGATCAAGG TCCTGCAGGA AGAAGAGGGC
ATGTCGGTGC TGTTCATCAC CCATGACATG GGGGTTGTGG CAGAGGTGTC TGACCGCACC
ATCGTGATGT TCCGGGGTGA AATGGTCGAA GGCGGCACGA CGGATGATAT TTTCAACCGC
GGCCAGCATC CCTATACGCG GGCATTGCTG TCGGCGGTGC CGAAACTCGG TTCGATGCAC
GGCCATGCCT TGCCGATGCG GTTTCCGGTG ATTGACATCA AGACCGGTGA CACCCTGGTC
GAGGAAGCGG AAGTCGGCGC CCTCGACATG GTGCCGCGCC CGATCCTCGA AGTGAAAAAT
CTGACGACAC GCTTTGCTAT CCGTTCGGGA CTGCTGGGGC GTAAATCCGG CGCTGTGCAT
GCGGTAGAAA ATGTCAGCTT CGATCTCAGG CCCGGCGAGA CCCTGTCGCT TGTCGGTGAA
TCCGGTTGCG GCAAGTCGAC GACGGGCCGC TCGATTACCC GACTGATCGA GCCGAGCAGC
GGCACGATTG CGCTCGATGG TTATAATGTC ATGTCGCTCG ACAGTAGCAC CCTGCGCAAG
ATGCGCCGCA GCATCCAGAT GGTGTTTCAG GACCCCTTTG CCAGCCTTGA TCCGCGTATG
TCGGTGGGTA CCGCGGTGAT GGAGCCGTTT CTGGAGCATA ACCTCGGCAC CAAGGCACAG
GCGCGCGAAA AGGCTGCCGA TCTGTTGCAG CGCGTCGGCC TCAGCGCCGA TATGATGCGC
CGCTACCCGC ATGAGTTTTC CGGCGGTCAG CGCCAGCGCG TCGCCATTGC CCGTTCGCTG
ATGCTCGATC CGAAAGTGAT CGTCGCCGAC GAAGCGGTCT CGGCGCTCGA CGTATCGATC
AAAGCGCAGG TCTGCAACCT GCTGCTTGAT TTGCAGGAAA GCTTCAATCT CGCCTATCTG
TTCATTTCCC ATGACATGGC CGTGGTGGAG CGCGTCAGCC ACCGGGTTGC GGTGATGTAT
CTGGGTGAAA TCGTTGAAAT CGGCCCGCGC CAGGCGGTGT TCGACAATCC GCAGCATCCC
TATACCAAAA AGCTGATCGC CGCGGTGCCG GTGCCCGATC CGGCGCGCCG CAACATCACC
CGGCAAATGT CCACCGATGA AATCAAGAGC CCGGTCCGGC CCCTCGGCTA TGAACCGCCA
GCGCGCCATT ACCGGGAGGT CTCGGCGGGA CATCTGGTGC AGGAAACGGT GTAA
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| Protein sequence | MAEDLTTQGA IQGGHVQPVL SVRNLTTSFR IGDQWSSVVR NMSFDVAPRE TVAIVGESGS
GKSVTSLSIM QLLPKNFSRI EGSIKLNGRE LLTLAPEEMR RVRGNDISMI FQEPMTSLNP
IFPIGKQIAE AILCHRDISR AEAKSEVIRL LEKVRIPNAK SRFDEFPHQF SGGMRQRVMI
AMALATKPKL LIADEPTTAL DVTIQGQILD LIKVLQEEEG MSVLFITHDM GVVAEVSDRT
IVMFRGEMVE GGTTDDIFNR GQHPYTRALL SAVPKLGSMH GHALPMRFPV IDIKTGDTLV
EEAEVGALDM VPRPILEVKN LTTRFAIRSG LLGRKSGAVH AVENVSFDLR PGETLSLVGE
SGCGKSTTGR SITRLIEPSS GTIALDGYNV MSLDSSTLRK MRRSIQMVFQ DPFASLDPRM
SVGTAVMEPF LEHNLGTKAQ AREKAADLLQ RVGLSADMMR RYPHEFSGGQ RQRVAIARSL
MLDPKVIVAD EAVSALDVSI KAQVCNLLLD LQESFNLAYL FISHDMAVVE RVSHRVAVMY
LGEIVEIGPR QAVFDNPQHP YTKKLIAAVP VPDPARRNIT RQMSTDEIKS PVRPLGYEPP
ARHYREVSAG HLVQETV
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