| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3842 |
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| Symbol | nth |
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| ID | 7388531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3192634 |
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| End bp | 3193398 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652598 |
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| Product | endonuclease III |
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| Protein accession | YP_002550779 |
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| Protein GI | 222149822 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.561189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATCCA GCACGCAAAC TTTGAAAAAG TCAATTTCTT CCCCCTCTCA ACCCAAGCCA
GCGGGACGAA AAGTCGCGGT TCGCAGCGCC TATTCCAAGG CCGAGCTGGA GGAAATCTTC
CGGCGGTTTT CCGTGCAGCG CCCGGAACCG AAGGGCGAGC TGGAGCATGT CAACCCGTTT
ACCCTTGTCG TCGCCGTGGC GCTCTCGGCG CAGGCAACCG ATGCGGGGGT CAACAAGGCG
ACCCGCGCCC TGTTTGCCGT GGCCGATACG CCGGAAAAAA TGCTGGCGCT GGGCGAAGAG
AAGGTGCGCG ACTATATCAA AACCATCGGA CTTTTTCGCA ACAAGGCGAA GAATGTCATC
GCCCTCAGTC AAAAGCTGAT CGATGATTTC GGCAGCGAGG TGCCAAAAAC CCGCGAAGAA
TTGGTGACGC TGCCCGGCGT CGGCCGCAAG ACTGCCAATG TGGTGATGTC CATGGCTTTT
GGCATTCCGA CCATGGCCGT CGATACGCAT ATTTTACGGA TCGGCAACCG CATCCGGCTG
GCACCCGGCA AGACACCGGA TGAGATCGAG GAGATCCTGA TGCGGATCAT CCCCAAGCAC
TATCTCTTCC ATGCCCATCA CTGGCTGATC CTGCATGGGC GCTACTGTTG CAAGGCCCGC
AAGCCGGAAT GCGAGCGCTG CGTGATTGCT GACCTGTGCA AATCGCCGGA AAAGACCTGC
GATGTTCCCG CGCCCCTGGT GGAACTACCG CCGCAGATCC TTTGA
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| Protein sequence | MKSSTQTLKK SISSPSQPKP AGRKVAVRSA YSKAELEEIF RRFSVQRPEP KGELEHVNPF
TLVVAVALSA QATDAGVNKA TRALFAVADT PEKMLALGEE KVRDYIKTIG LFRNKAKNVI
ALSQKLIDDF GSEVPKTREE LVTLPGVGRK TANVVMSMAF GIPTMAVDTH ILRIGNRIRL
APGKTPDEIE EILMRIIPKH YLFHAHHWLI LHGRYCCKAR KPECERCVIA DLCKSPEKTC
DVPAPLVELP PQIL
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