Gene Avi_3841 details

Gene Information

• Locus tag: Avi_3841
• ID: 7388530
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 3191947
• End bp: 3192654
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643652597
• Product: CysZ-like protein
• Protein accession: YP_002550778
• Protein GI: 222149821
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG2981] Uncharacterized protein involved in cysteine biosynthesis

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGTCGC TGCGCAATCT GTTTGCGCCG GAAACCCGTT CGGTGTTCTG GAAAGTGCTG 
GGCTTGACGC TGGCCGCCCT GGCCGGGCTG TGGCTGGCGC TGCGTGAGCT GTTTATCTTC 
TATCTTTGGC CCTGGTTTGC CGGGTTTTTC CCCGCAACGC CGGATTGGGC CGGCTGGCTG 
GTGCTGATCC TCGGCATTGT CGCCAGTATT GGCCTGGCAT TGGTGCTGGC GCTGCTTTTG 
GCGCCGGTCA CGGCCATCAT TGCTGGCCTG TTTCTTGATG ATGTCGCCGA AGTCGTGGAA 
AAGCGGGATT ACCCGACCGA TGCGCCCGGC ACGGCCATGC CGCTTGGCGA TGCCATCGTC 
CAATCGCTGC AATTTTTCGG CATCGTCATC CTCGGCAATC TCATTGCCTT CATGCTGCTC 
TTCGTGCCGG GCATCAACCT GATCGCGTTT TTCCTGGTCA ATGGCTATCT GCTGGGCCGG 
GAGTTTTTCG AATTTGCCGC CATGCGGCTG CGCCCGACCA TCGAGGCGCG GCAATTTCGC 
GCCAAGCATT CCGGCACGAT CTTCCTGGCC GGACTGGTGA TAGCAGCGTT TCTAGCAATC 
CCTATCCTCA ACCTGCTGAC GCCGCTGTTT GCCGCAGGGC TGATGGTGCA TCTGCACAAG 
ATGCTGTCGG TCAAAGACCC GCAGTTTTCA AAGGATCTGC GGCGGTAG 

 

Protein sequence

MLSLRNLFAP ETRSVFWKVL GLTLAALAGL WLALRELFIF YLWPWFAGFF PATPDWAGWL 
VLILGIVASI GLALVLALLL APVTAIIAGL FLDDVAEVVE KRDYPTDAPG TAMPLGDAIV 
QSLQFFGIVI LGNLIAFMLL FVPGINLIAF FLVNGYLLGR EFFEFAAMRL RPTIEARQFR 
AKHSGTIFLA GLVIAAFLAI PILNLLTPLF AAGLMVHLHK MLSVKDPQFS KDLRR