| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3761 |
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| Symbol | glgC |
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| ID | 7388218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3127228 |
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| End bp | 3128493 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652534 |
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| Product | glucose-1-phosphate adenylyltransferase |
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| Protein accession | YP_002550715 |
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| Protein GI | 222149758 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0448] ADP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGCCGA CAAAGAGAAT TCAGCCGCTG GCGCGCGATG CCATGGCGTA TGTACTGGCC
GGCGGACGGG GCAGCCGCCT TAAGGAGCTG ACCGACCGGC GGGCAAAACC CGCCGTCTAT
TTCGGTGGCA AAGCCCGGAT CATCGATTTT GCCCTGTCGA ATGCGCTAAA TTCCGGTATT
CGCCGCATTG GCGTCGCCAC CCAGTACAAG GCCCATTCGC TGATCCGCCA CATGCAGCGC
GGTTGGGATT TCCTGCGGCC CGAGCGCAAT GAAAGCTTCG ACATCCTGCC CGCCAGCCAG
CGCGTTTCCG AAACGCAATG GTATGAAGGC ACGGCAGATG CCGTCTTCCA GAACATCGAT
ATTATCGAGC CCTATGGCCC GGAATATATG GTGATCCTGG CGGGCGACCA CGTCTATAAG
ATGGACTATG AATTCATGCT CCAGCAGCAT GTTGACAGCG GTGCCGATGT CACGATTGGC
TGCATGGAAG TGCCGCGCAT GGAAGCCTCG GCGTTCGGTG TCATGCATGT CGATGACAAG
GACCAGATCA TTGCCTTCGT CGAAAAGCCC GCCGATCCAC CGGGCATTCC CGGCAACGAG
ACCATGGCGC TGGCCTCGAT GGGCATTTAC GTGTTCCACA CCAAATTTCT GATGGATTGC
CTGCGCCGCG ATGCCGCCGA CCCCAATTCC AGCCGGGATT TCGGCAAGGA CATCATTCCC
TATATCGTCG AGCATGGCAA AGCCGTGGCG CATCGCTTTG CCTCCTCCTG CGTGCGCTCG
GATTTCGAAA AGACCCCCTA TTGGCGCGAT GTCGGCACCA TCGATGCCTA TTGGCAGGCC
AATGTTGACC TGACCGACAT CCTGCCGGAA CTGGACATCT ACGACAAATC CTGGCCAATC
TGGACCTATG CCGAAATCAA TCCACCGGCA AAATTCGTCC ATGACGATGA AGGCCGCCGC
GGTTCGGCAA TTTCCTCTCT CGTCTCGGGG GATTGCATCA TATCCGGCTC GACGCTCTAT
CGCAGCCTGC TGTTTACCGG GGTTCGCGCC AATTCCTATT CGAGGTTGGA AGGCGCCGTC
ATTCTGCCCA AGGTCACTAT TGGCCGTCAT GCCCGCTTGA CCAATGTGGT GATCGATCAT
GGCGTCACCA TTCCCGAAGG GCTGATCGTC GGCGAAGACC CGGAAATCGA CGCCAAGCGC
TTCCGCCGCA GTGAAAACGG TATCTGCCTG ATCACCCAGG CAATGCTGGA CAAGCTGGAG
CAATAG
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| Protein sequence | MTPTKRIQPL ARDAMAYVLA GGRGSRLKEL TDRRAKPAVY FGGKARIIDF ALSNALNSGI
RRIGVATQYK AHSLIRHMQR GWDFLRPERN ESFDILPASQ RVSETQWYEG TADAVFQNID
IIEPYGPEYM VILAGDHVYK MDYEFMLQQH VDSGADVTIG CMEVPRMEAS AFGVMHVDDK
DQIIAFVEKP ADPPGIPGNE TMALASMGIY VFHTKFLMDC LRRDAADPNS SRDFGKDIIP
YIVEHGKAVA HRFASSCVRS DFEKTPYWRD VGTIDAYWQA NVDLTDILPE LDIYDKSWPI
WTYAEINPPA KFVHDDEGRR GSAISSLVSG DCIISGSTLY RSLLFTGVRA NSYSRLEGAV
ILPKVTIGRH ARLTNVVIDH GVTIPEGLIV GEDPEIDAKR FRRSENGICL ITQAMLDKLE
Q
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