Gene Avi_3683 details

Gene Information

• Locus tag: Avi_3683
• Symbol: purE
• ID: 7388081
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 3052738
• End bp: 3053238
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643652478
• Product: phosphoribosylaminoimidazole carboxylase catalytic subunit
• Protein accession: YP_002550660
• Protein GI: 222149703
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
• TIGRFAM ID: [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.132309
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGATG AAAGACCGCC CGTCGCCATC ATCATGGGAA GCCAGTCCGA CTGGGAAACC 
ATGAAGAACG CTGCCGACAC CCTGGACGCA CTTGGCGTCA GCTACGAGGC ACGCATTGTC 
TCCGCCCATC GCACCCCCGA CCGCATGGTC GCTTTTTCCA AGGGTGCACG CGACGAAGGC 
TTCCAGGTGA TCATTGCCGG AGCTGGCGGC GCCGCCCACC TGCCCGGCAT GGTCGCCTCG 
ATGACAGCGC TTCCGGTTTT CGGCGTGCCG GTGCAGTCAA AAACCATGTC CGGCCTCGAC 
AGCCTTTATT CCATCGTGCA GATGCCGGCC GGTATTCCGG TCGGAACGCT CGCCATCGGC 
CGGGCTGGCG CTGTCAATGC CGCCCTGCTC GCAGCAAGAG TTCTGGCGTT GCAGGATGCC 
GATCTCGCCG ACCGGCTGGA TGACTGGACA GACAATCAGA CTGCCGCCGT TGCCGACTAT 
CCCACCGACG AAGCTCCCTG A 

 

Protein sequence

MQDERPPVAI IMGSQSDWET MKNAADTLDA LGVSYEARIV SAHRTPDRMV AFSKGARDEG 
FQVIIAGAGG AAHLPGMVAS MTALPVFGVP VQSKTMSGLD SLYSIVQMPA GIPVGTLAIG 
RAGAVNAALL AARVLALQDA DLADRLDDWT DNQTAAVADY PTDEAP