Gene Avi_3644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3644 
Symbol 
ID7387988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp3027371 
End bp3028009 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content61% 
IMG OID643652454 
Producttranscriptional regulator protein 
Protein accessionYP_002550636 
Protein GI222149679 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCAAC CACCTCATTT TCGCCAGACC GACCACGAAG CGCTTTGCCA GTTCATCATG 
GCACAGCCGT TTGGCCTGCT GATCTCCTCT GGAAGCGGCG GATTGATCGC CAATCCCCTG 
CCCTTCTTCC TCTTGCGCGG TAACGACACG CAGCCGGACC GGCTGCTGGC GCATATGGCG 
CGGGCCAATC CGCAATGGCA GGCCATCGAT GCGGGAGACG AGGTTCTCGT CGCCTTCATG 
GGCTCTGACC ATTACATCTC CCCCAATTGG TATCCCAGCA AACAGGAAAC CGGCAAAGTC 
GTGCCAACCT GGAATTACCA GACCGTGCAG GTCAGAGGCA TGGCAAAAGC ACATCAGGAC 
CCAGCCTGGC TGCTGGCGCA GGTCCGCCTG CTGACCGATC AGATGGAAGC CTCCGGTCCT 
CGCCCCTGGG CCGTCGATGA TGCACCTGAC AATTTCGTCG CAGCCCAGAT GCGCGGCATC 
GTTGGGGTCG AAGTGCAGAT TTCTCATCTC GAGGGCAAGC TGAAGGCCAG CCAGAACCGG 
ACAGACATCG ACCGGCAAGG CGTGCTGGAT GGACTTGGCG GGCAAGCAAC ACCCCAGGCC 
AACGCCATGG CCGCGCTGAT GCGACGTGCC AAGAGCTGA
 
Protein sequence
MYQPPHFRQT DHEALCQFIM AQPFGLLISS GSGGLIANPL PFFLLRGNDT QPDRLLAHMA 
RANPQWQAID AGDEVLVAFM GSDHYISPNW YPSKQETGKV VPTWNYQTVQ VRGMAKAHQD 
PAWLLAQVRL LTDQMEASGP RPWAVDDAPD NFVAAQMRGI VGVEVQISHL EGKLKASQNR 
TDIDRQGVLD GLGGQATPQA NAMAALMRRA KS