| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3574 |
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| Symbol | |
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| ID | 7386495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2970639 |
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| End bp | 2972210 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652405 |
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| Product | ribitol kinase |
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| Protein accession | YP_002550588 |
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| Protein GI | 222149631 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1069] Ribulose kinase |
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| TIGRFAM ID | [TIGR01315] FGGY-family pentulose kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.197802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGATC ATCTGATTGC GGTGGATGTC GGCACCGGCA GCGCGCGTGC CGGTGTCGTG
ACGCGCACCG GTCGCCTGCT GGCCCGGCGC GAACACCCGA TCCTGCTGTC TCGCCCAAGC
GATGAGCGTG GCGAACACAA TTCCCAGGAT ATCTGGGAGG CCTGCTGTAT TGCGGTCAAG
GCAGCGCTTG CCGAGGCTGG TATCGGTCCC GCAGCCATTG CCGGTATTGG TTTCGATGCC
ACCTGCTCGC TGGTGCTGCT TGACAGAAGC GGCCAGCCGC TCTGCCTGAA TGGGGAGGAT
GGTTTCGACA CAATTTCCTG GCTGGATCAC CGCGCCACGG CTGAAGCCGA AGAATGCGGA
CATATCGATC ATCCGGTGCT GCACCACAAT GGCCGGGTCA TCTCCCCTGA AGCCGAAATC
CCCAAGCTGA TGTGGCTGAA GCGTCATCGC CCGGATCTCT GGCAAAGACT GGGTTTAGCC
TTCGATCTCG CTGATTTCCT CACCTGGAAG GCGACGGGCA GCCCGGCGCG GTCGCTCTGC
ACTCTGACAT CGAAATGGAT GTTTTTCGGC CACAGCAAGC CCGGCTGGCA ACAGGATTTT
CTGGACCGCA TCGGGCTGGA TGACCTGGTG GCCCGCGCAG GCTTACCAGA AGAGGCGGTT
GCGGTCGGCA AAAGCGTCGG CACCCTCAGC ACCGACGCTG CGGACGCGCT GGGTCTTATT
CCTGGCACTC CCGTTGCCGC AGGCATGGTT GATGCCTATG CAGGCGCGCT TGGCGTGTTG
GGATCAACGG ATCTCTCAGA CCCTGACCTC AACCACGTGG CGATGATCGG CGGTACCTCC
AGCTGCCTGA TTGCGCTCCG GCCCCAGCCT CTTTACGGCT TCAGCCTCTG GGGGCCTTAT
TTCGGGGCGA TCTTTCCAGA TCTCTGGCTG GTGGAGGCCG GACAATCGGC CACAGGCGCG
CTTCTCAATC ATCTTGTCCG CAGTCATGCG GAAGGCGGCG AACCGAGCAT CGACAACCAT
CGCCGCATCA TTGCCCGGAT CGCTGAATTA CGTGCCCACG AAGGCGCGTC GTTCGGCCAG
AAAATCAACG TCCTGCCGGA TTTTCATGGC AACCGCTCGC CCTTTGCCGA TCCGAACCTG
ACGGGAACAA TCTCCGGCCT GACGCTGGAT GCCTCGTTTG ACGGGCTCTG CCGTCTCTAT
TGGCGGGCCT GTGTCGGCAT TGTGCTTGGC CTGCGCCAGA TCGTCGAGAC GCTCGGCAAG
GACGGTATAG GCCCGCTGCG CCTGCATCTC ACCGGCGGTC ACGTCAAAAA CCCGCTTCTG
GTTGAGCTTT ACGCCGAGGC GACCGGCTGC GAACTGGTGG TGGCCGACGG CACAGATGCC
GTGCTGATTG GCACCGCCAT CAATGCCGCC AGCGCCGCCG GCCTTTATCC CGGCCTTGCT
GAGGCAGGCG CAGCCATGGC CGAACCAGGG CGGCTCGTCG TGCCGAACCC AGATATGAAA
GGCATTTACG ACCGCGACTA TGCCCGTTTT CTCGCCATGC AGCGGCACCG GGCCGAGCTG
GACGCGATCT GA
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| Protein sequence | MRDHLIAVDV GTGSARAGVV TRTGRLLARR EHPILLSRPS DERGEHNSQD IWEACCIAVK
AALAEAGIGP AAIAGIGFDA TCSLVLLDRS GQPLCLNGED GFDTISWLDH RATAEAEECG
HIDHPVLHHN GRVISPEAEI PKLMWLKRHR PDLWQRLGLA FDLADFLTWK ATGSPARSLC
TLTSKWMFFG HSKPGWQQDF LDRIGLDDLV ARAGLPEEAV AVGKSVGTLS TDAADALGLI
PGTPVAAGMV DAYAGALGVL GSTDLSDPDL NHVAMIGGTS SCLIALRPQP LYGFSLWGPY
FGAIFPDLWL VEAGQSATGA LLNHLVRSHA EGGEPSIDNH RRIIARIAEL RAHEGASFGQ
KINVLPDFHG NRSPFADPNL TGTISGLTLD ASFDGLCRLY WRACVGIVLG LRQIVETLGK
DGIGPLRLHL TGGHVKNPLL VELYAEATGC ELVVADGTDA VLIGTAINAA SAAGLYPGLA
EAGAAMAEPG RLVVPNPDMK GIYDRDYARF LAMQRHRAEL DAI
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