| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3573 |
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| Symbol | |
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| ID | 7388836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2969939 |
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| End bp | 2970613 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643652404 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550587 |
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| Protein GI | 222149630 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.141866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGACC CGGCCACCAA GCTGGTGATC TTTGATTGCG ACGGCGTGCT GGTCGATAGC
GAGCCGATCT CTGTCGAGGT CATGGTGGCC GAGTTTCAAA AAGCCGGCGT GGCGATTGAT
GCGGATTATG TCTATCGCAA CTTCCTTGGC CGCAGCATGG CAACGGTGGT GGACACCGCC
CGAGAGGAAT TTTCATTTGC CATTGGTGAG AGCTTTCTGA GCGGTCTGCG CACCCATCTG
TATGAACGCT TCCGGCAGGA TTTAAAGCCG ATTTCCGGCC TACACACCGC ACTCGACGAT
CTCAGCAAAG CGGGCATTCA CTGGTGCGTG GCCTCCTCCA GCCAGCCAGA TCGCATTGCT
CTGTCACTTA GCGTCACCGG GTTGATCGAG CGTTTTCAGC CCCATATTTT CAGCGCCACC
ATGGTGAAAA ACGGCAAGCC CGCACCGGAC CTGTTTCTGT ATACCGCCGA GAAAATGGCA
ACACAACCAC ACCAATGTGT GGTGGTGGAA GATAGCCCCG CAGGCCTCAC CGCCGCCCGC
GCCGCTGGCA TGCGCGCCTT AGCCTTTACC GGCGGCGGCC ATGCGTTGGG CGAAATCTAC
CACGACAGCA TTGACGCCCT GAAGCCAGAC GCCAAATTTG ACGCCATGGC CAATCTGGTT
CAGTTTGTCT TATAA
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| Protein sequence | MHDPATKLVI FDCDGVLVDS EPISVEVMVA EFQKAGVAID ADYVYRNFLG RSMATVVDTA
REEFSFAIGE SFLSGLRTHL YERFRQDLKP ISGLHTALDD LSKAGIHWCV ASSSQPDRIA
LSLSVTGLIE RFQPHIFSAT MVKNGKPAPD LFLYTAEKMA TQPHQCVVVE DSPAGLTAAR
AAGMRALAFT GGGHALGEIY HDSIDALKPD AKFDAMANLV QFVL
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