Gene Avi_3560 details

Gene Information

• Locus tag: Avi_3560
• Symbol: ung
• ID: 7388824
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 2954582
• End bp: 2955283
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643652392
• Product: uracil-DNA glycosylase
• Protein accession: YP_002550575
• Protein GI: 222149618
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0692] Uracil DNA glycosylase
• TIGRFAM ID: [TIGR00628] uracil-DNA glycosylase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCAAT CGACGCTTCG CTTGGAAGAC AGCTGGAAGG CCGTGGTCGG CGAGGAATTC 
GAAAAGCCCT ATATGCAGAC CCTCAAGCAG TTTCTGGTCG AGGAAAAGCA GCAGGGCAAG 
CCGATTTTCC CCAAAGGGCC GGAGTATTTC CGGGCGCTGG ATCTGACCCC CATCGACAAG 
GTGCGAGTGG TGATCCTGGG GCAGGACCCC TATCACGGCG CAGGACAGGC GCACGGCCTG 
TGCTTTTCTG TCCAGCCCGG CGTGCGCATT CCGCCGTCGC TGGTCAATAT CTACAAGGAA 
TTGCAGGCCG ATCTCGGTAT TGCCCCGGTG CGCCACGGTT TTCTGGAACA TTGGGCGCGC 
CAGGGCGTGC TGCTGCTCAA CAGCGTGTTG ACGGTGGAAG AGGGCAGGGC CGGATCGCAT 
CAGGGCAAGG GTTGGGAAAA GTTCACCGAC CGGGTCATCC ATGCCGTGGC CGAACGCCGC 
GAGCATGTAG TCTTCATCCT TTGGGGGGCT TACGCGCAGA AAAAGGCGGC TTTCGTCGAT 
CCGGCCCGGC ATCTGGTGCT GAAATCCGTG CATCCGTCGC CATTGTCTGC CCATAACGGC 
TTTTTCGGCT CAAAGCCGTT TTCCAAAGCC AACGCCTATC TGGAAGCGCA TGGAGAGGTC 
CCCATCGACT GGCAGCTTCC AGCCGATCCA GGACAGGGAT AG 

 

Protein sequence

MAQSTLRLED SWKAVVGEEF EKPYMQTLKQ FLVEEKQQGK PIFPKGPEYF RALDLTPIDK 
VRVVILGQDP YHGAGQAHGL CFSVQPGVRI PPSLVNIYKE LQADLGIAPV RHGFLEHWAR 
QGVLLLNSVL TVEEGRAGSH QGKGWEKFTD RVIHAVAERR EHVVFILWGA YAQKKAAFVD 
PARHLVLKSV HPSPLSAHNG FFGSKPFSKA NAYLEAHGEV PIDWQLPADP GQG