| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3498 |
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| Symbol | |
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| ID | 7388770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2897425 |
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| End bp | 2900802 |
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| Gene Length | 3378 bp |
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| Protein Length | 1125 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652338 |
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| Product | two component sensor kinase |
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| Protein accession | YP_002550521 |
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| Protein GI | 222149564 |
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| COG category | [F] Nucleotide transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver
[COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCAC GCCAACGCAT CATTCCCGTC CGACGCCAAT ATAACCGCTG GGTGGCCGAC
CAGACGCTGG AAGATTATGC GCTGCGCTTT ACCGCCAAAA GTGCGCGCCG GTTCTCCTCC
AGCCGGATTT CCCAGACTGC CATCGGGGCG ATCTCCTTTC TGGCGCTGGA GGCGATTGGC
GGCACGATCA CGCTGTCCTA TGGCACCACC AATGCGTTTT TCGCCATTCT GGTCGCTGCC
GTCCTGATGC TGCTGGTTGG CCTGCCGATC AGCCGTTATG CGATCCGCGA AGGCGTCGAT
ATCGATCTTC TGACAAGAGG TGCTGGCTTC GGCTATATCG GCTCAACGCT GACCTCGCTG
ATCTATGCCA GCTTCACCTT CATGCTGTTT GCCATCGAAG CCTCGATCAT GACCGGGGCC
TTGGCGCTGG CCTTCGGCAT TCCACCCTCG ATCGGCTACA TTATTTCAGC GGTGGTGGTC
ATTCCGCTGG TCACTTACGG CATCCAGCTG ATCTCGAAAT TCCAGCTTCT CACCCAGCCG
ATCTGGATCG TGCTGAATAT CGCGCCCTTC GTGTTCATCG CCTTTCAGGA CTGGGAAAAA
TTCGACCTTT GGCGGGCCTT TGCCGGCATT CACCAATCCA ATGCCGGAAC GCAGAGCGTA
GCGCCGTTTC GTCTCGCCGA TTTTGGTGCC GCCTCCGCCG TCATCCTGGC GTTGATGCCA
CAGATTGGCG AACAGGTGGA TTTCCTGCGC TTCCTGCCGC CGGAGGGCGG GCGCAAGCTT
CACCACCGTT TCATGGTGTT TCTGGCCGGT GCCGGCTGGG TGGTGCTGGG CGTGCCAAAG
CTGCTGGCTG GTTCCTTCCT CGCCGTGCTG ACACTCTCGA CCGGCGTTAG TCTGAGCGAG
GCCGCCGATC CCGCCCATAT GTATCTGGCC GCCTTTGGCT ATATCCTGCC CAATCAGACG
CTGGCCATGC TGCTGATGGT CGCCTTCGTG GTGGTGTCGC AGTTGAAGAT CAACGTGATG
AATGCCTATG CAGGGTCGCT CGCCTGGTCG AATTTCTTCT CCCGCCTCAC CCATAGCCAT
CCAGGCCGGG TGGTCTGGCT GGTGTTCAAT GTCGGCATCG CGCTGCTGTT GATGGAGCTT
GGCATCTACC GGCTGCTGGA AGCGACGCTC GGGATCTTCT CGATCATCGC CATGGCCTGG
CTCTGCACCA TTTCCGCCGA TCTGTTCATC AACAAGCGGT TGGGCCTTGC GCCTGAGGGT
ATCGAGTTCA AACGCGCCCA TCTCTATGAC ATCAACCCGG TCGGTTGCGG CACGCTGCTG
ATTTCGGCCA GCCTGGCGCT GGCGGCGCAT TTCGGCCTGT TCGGGCCGTT GATGGCCTCG
CTCTCCACCT TCGTGACGCT GGTCGCCTTC CTGATTTCGC CGCTGATCGC CTGGGGGACC
AAGGGCAAAT TCTATCTGGC CCGCAAGCCG CGCCATGCCT GGAAAAACCT TGGCCATATC
ACCTGTTCGA TCTGCGAACA TCCGTTCGAG CCTGAAGATA TGGCATGGTG CCCGGCCTAT
GCCGCGCCGA TCTGTTCGCT GTGCTGCTCG CTGGATAGCC GCTGCCATGA CATGTGCAAA
CCGAAGGCCC GGCTGAACAC CCAGGTCGGC ACCGTCGCCC GCACTGTGCT GCCCAGCACT
GTGATCGAAA AGCTGACGAC CCGGCTTGGC CGCTATGCGA TGACCAGCAT CGGGGCGATT
TCGCTGGTGG GCGCGATCTT GGCGTTGATT GCTCATCAGG TCTCCGCCGC CTCACCAGAA
ACCGAACTGG TGGTCAATGC GACGGTGTTG ATCGTGTTCT TCGTGTTTTC GGTGATTGCC
GGCATCGCCA CCTGGTTCTA CGTGCTGGCC CATGACAGCC GATTGGTGGC GGAAGAAGAA
TCCTACCGCC AGAACAGTCT GCTATTGAAG GAAATCGCCG CGCACCGCAA AACCGACGCC
GCGCTTCAGA CCGCCAAGGA AACGGCAGAA GCCGCCAACC GTGCCAAGAG CCGCTATGTG
GTGGGCCTCA GCCATGAATT GCGCACCCCG CTCAACGCTG TGATGGGCTA TGCGCAATTG
TTGGAGCAGG ACGACACCAT TCCGGCTCCG CGCCAATCCG CCATCCGGGT GATCCGCCGC
TCCGCCGACC ATCTTTCCGG GCTGATCGAC GGGCTGCTGG ACATTTCCAA GATCGAGGCC
GGTCGGCTAC AAGTGTTTTC CGCCGAGCTG AATATTCATG ATTTCCTCGA CCAGATTATT
GACATGCTGC GCCCGCAGGC CGAGGCCAAG GGTCTGACCT TTACCCACAC CCGCGCCAAA
AACCTGCCGC AATATGTGCG GGCCGACGAG AAACGGCTGC GCCAGATTCT CGTCAATCTG
CTGTCCAACG CCATCAAATT CACCGATGCG GGTACGGTCA CGTTCGACAT CGCCTATCGC
AGCCAGGTTG CCAGCTTCAC CGTCACCGAT ACCGGGCGCG GCATTGCGCA GAAAGACCTG
AGCCGGATCT ATGAACCCTT TCAGCGCGGC GAGGCCGACA CGATCCGTCC GATGCCGGGG
CTTGGGCTGG GCCTGACCAT CACCAAGCTG CTGACCAATA CGCTGGGCGG CGAAATCGCC
GTGGAGAGCG AAACGGACAA AGGCACGACC TTCCGGGTGC GGCTGATGCT GTCTTCCGTT
GACCGGCCCA GCACAGCACC CAAGGCAGAA CGCAAGATCC TTTCCTATGA CGGCCCGCGC
CGCACCATCG TCGTGGTCGA TGACAACGAG GACCACCGCG AACTGATGCG CGAGGCGCTG
GCACCCCTGG ATTTCATCGT GCTGACCGCC ACCGGCGGGC CAGATTGTCT GGCGCTGATC
GAAGGTGTCA AACCCGACCT GTTCCTGGTC GATATTTCCA TGCCCGGCAT GAATGGCTGG
CAATTGGTCG AACGGCTGCG TGACGCAGGC CAGAGCGCGC CGATCCTGAT GCTGTCGGCC
AATATCGGCG ATGGCGCGGT GCGCGAGCCC GGCTCCGGTG GCCATAACGA CGCTATCGCG
AAGCCCGTGG ACGTGAAAAT GCTGCGCGAC AAGCTGGCCC GCCACTTGAA ACTGCGTTGG
CTCTATGCCG AAGACATGGC CCCGCCCGCC CCCGCCTTGG CCGCTGGCAC GCCACGCGAT
CCCGGCCTTG CCCACCGCGA GGACCTGCGC AAACTGGCCG AAATCGGCTA TATCAGGGGC
TTGGAAAACA AATTGCAGGA ACTGGCCAAG ACACCCGATA TGCTGCCCTT CACCGAGGAG
TTGCGCCCCT TCGTGCAGGC TTTCGATATG GCCGGACTGA TCGCCTGTCT TGATCGCTAT
CAGGAGGGCG CGGCATGA
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| Protein sequence | MAARQRIIPV RRQYNRWVAD QTLEDYALRF TAKSARRFSS SRISQTAIGA ISFLALEAIG
GTITLSYGTT NAFFAILVAA VLMLLVGLPI SRYAIREGVD IDLLTRGAGF GYIGSTLTSL
IYASFTFMLF AIEASIMTGA LALAFGIPPS IGYIISAVVV IPLVTYGIQL ISKFQLLTQP
IWIVLNIAPF VFIAFQDWEK FDLWRAFAGI HQSNAGTQSV APFRLADFGA ASAVILALMP
QIGEQVDFLR FLPPEGGRKL HHRFMVFLAG AGWVVLGVPK LLAGSFLAVL TLSTGVSLSE
AADPAHMYLA AFGYILPNQT LAMLLMVAFV VVSQLKINVM NAYAGSLAWS NFFSRLTHSH
PGRVVWLVFN VGIALLLMEL GIYRLLEATL GIFSIIAMAW LCTISADLFI NKRLGLAPEG
IEFKRAHLYD INPVGCGTLL ISASLALAAH FGLFGPLMAS LSTFVTLVAF LISPLIAWGT
KGKFYLARKP RHAWKNLGHI TCSICEHPFE PEDMAWCPAY AAPICSLCCS LDSRCHDMCK
PKARLNTQVG TVARTVLPST VIEKLTTRLG RYAMTSIGAI SLVGAILALI AHQVSAASPE
TELVVNATVL IVFFVFSVIA GIATWFYVLA HDSRLVAEEE SYRQNSLLLK EIAAHRKTDA
ALQTAKETAE AANRAKSRYV VGLSHELRTP LNAVMGYAQL LEQDDTIPAP RQSAIRVIRR
SADHLSGLID GLLDISKIEA GRLQVFSAEL NIHDFLDQII DMLRPQAEAK GLTFTHTRAK
NLPQYVRADE KRLRQILVNL LSNAIKFTDA GTVTFDIAYR SQVASFTVTD TGRGIAQKDL
SRIYEPFQRG EADTIRPMPG LGLGLTITKL LTNTLGGEIA VESETDKGTT FRVRLMLSSV
DRPSTAPKAE RKILSYDGPR RTIVVVDDNE DHRELMREAL APLDFIVLTA TGGPDCLALI
EGVKPDLFLV DISMPGMNGW QLVERLRDAG QSAPILMLSA NIGDGAVREP GSGGHNDAIA
KPVDVKMLRD KLARHLKLRW LYAEDMAPPA PALAAGTPRD PGLAHREDLR KLAEIGYIRG
LENKLQELAK TPDMLPFTEE LRPFVQAFDM AGLIACLDRY QEGAA
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